RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 HLA-DQB1P01920 261 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 NAA10P41227 235 aaPredicted RBP12.63□□□□□ -0.39
VAMP2-201ENST00000316509 EGR3Q06889 387 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 ZP4Q12836 540 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 TOMM34Q15785 309 aaPredicted RBP12.63□□□□□ -0.39
VAMP2-201ENST00000316509 BAK1Q16611 211 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 PYDC2Q56P42 97 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 ZMAT1Q5H9K5 638 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 C1orf140Q5VVS0 124 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 LRRC28Q86X40 367 aaPredicted RBP12.63□□□□□ -0.39
VAMP2-201ENST00000316509 ZNF524Q96C55 264 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 CMTM3Q96MX0 182 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 SPSB2Q99619 263 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 WDR77Q9BQA1 342 aaPredicted RBP12.63□□□□□ -0.39
VAMP2-201ENST00000316509 PTDSS2Q9BVG9 487 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 SLC22A4Q9H015 551 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 C14orf119Q9NWQ9 140 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 MRPL39Q9NYK5 338 aaKnown RBP12.63□□□□□ -0.39
VAMP2-201ENST00000316509 ABRACLQ9P1F3 81 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 GNG8Q9UK08 70 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 TBC1D24Q9ULP9 559 aa12.63□□□□□ -0.39
VAMP2-201ENST00000316509 PRUNE2Q8WUY3 3088 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 IGLV3-32A0A0A0MS00 114 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 TRBV2A0A0J9YWF9 115 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 MEN1O00255 615 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 ETV2O00321 342 aaPredicted RBP12.62□□□□□ -0.39
VAMP2-201ENST00000316509 XKRYO14609 159 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 KHNYNO15037 678 aaKnown RBP12.62□□□□□ -0.39
VAMP2-201ENST00000316509 SNPHO15079 494 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 ZNF208O43345 1280 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 SELENOFO60613 162 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 OR6A2O95222 327 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 F13BP05160 661 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 UCHL1P09936 223 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 EDNRAP25101 427 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 ACVR1BP36896 505 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 CAV3P56539 151 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 RPL27P61353 136 aaKnown RBP12.62□□□□□ -0.39
VAMP2-201ENST00000316509 COL28A1Q2UY09 1125 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 YIF1BQ5BJH7 314 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 CNIH2Q6PI25 160 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 SHISA6Q6ZSJ9 500 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 FAM220AQ7Z4H9 259 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 TIGD4Q8IY51 512 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 MAML2Q8IZL2 1156 aaPredicted RBP12.62□□□□□ -0.39
VAMP2-201ENST00000316509 AGBL5Q8NDL9 886 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 OR51L1Q8NGJ5 315 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 SLC22A8Q8TCC7 542 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 ZNRF4Q8WWF5 429 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 ADAD1Q96M93 576 aaKnown RBP12.62□□□□□ -0.39
VAMP2-201ENST00000316509 KLHL15Q96M94 604 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 CRB3Q9BUF7 120 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 TXNIPQ9H3M7 391 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 TIGARQ9NQ88 270 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 IGHV3-20A0A0C4DH32 117 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 TRBV11-1A0A0K0K1C0 115 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 NPIPB13A6NJU9 1138 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 CENPBD1B2RD01 187 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 ZNF879B4DU55 563 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 NPIPB4C9JG80 1138 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 PDCD5O14737 125 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 HPGDSO60760 199 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 ZNF432O94892 652 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 CSF3P09919 207 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 RAB3BP20337 219 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 APEX1P27695 318 aaKnown RBP12.62□□□□□ -0.39
VAMP2-201ENST00000316509 GXYLT1Q4G148 440 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 MESTQ5EB52 335 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 PHF19Q5T6S3 580 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 CDC20BQ86Y33 519 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 SCAIQ8N9R8 606 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 ZNF248Q8NDW4 579 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 ZPLD1Q8TCW7 415 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 POTEKPQ9BYX7 375 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 WDR76Q9H967 626 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 GPN3Q9UHW5 284 aaPredicted RBP12.62□□□□□ -0.39
VAMP2-201ENST00000316509 COPS3Q9UNS2 423 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 ZNF281Q9Y2X9 895 aa12.62□□□□□ -0.39
VAMP2-201ENST00000316509 LOC102723996A0A087X1L8 192 aa12.61□□□□□ -0.39
VAMP2-201ENST00000316509 NOTOA8MTQ0 251 aa12.61□□□□□ -0.39
VAMP2-201ENST00000316509 KLK3P07288 261 aaPredicted RBP12.61□□□□□ -0.39
VAMP2-201ENST00000316509 PRKCAP17252 672 aa12.61□□□□□ -0.39
VAMP2-201ENST00000316509 TALDO1P37837 337 aa12.61□□□□□ -0.39
VAMP2-201ENST00000316509 HCCSP53701 268 aa12.61□□□□□ -0.39
VAMP2-201ENST00000316509 ZFP36L1Q07352 338 aaKnown RBP12.61□□□□□ -0.39
VAMP2-201ENST00000316509 INSL4Q14641 139 aa12.61□□□□□ -0.39
VAMP2-201ENST00000316509 SLC25A53Q5H9E4 307 aa12.61□□□□□ -0.39
VAMP2-201ENST00000316509 IDNKQ5T6J7 187 aa12.61□□□□□ -0.39
VAMP2-201ENST00000316509 HACD4Q5VWC8 232 aa12.61□□□□□ -0.39
VAMP2-201ENST00000316509 SFXN4Q6P4A7 337 aa12.61□□□□□ -0.39
VAMP2-201ENST00000316509 MFSD8Q8NHS3 518 aa12.61□□□□□ -0.39
VAMP2-201ENST00000316509 THRSPQ92748 146 aa12.61□□□□□ -0.39
VAMP2-201ENST00000316509 MRI1Q9BV20 369 aa12.61□□□□□ -0.39
VAMP2-201ENST00000316509 SRA1Q9HD15 236 aaKnown RBP12.61□□□□□ -0.39
VAMP2-201ENST00000316509 CYSLTR2Q9NS75 346 aa12.61□□□□□ -0.39
VAMP2-201ENST00000316509 VSX1Q9NZR4 365 aaPredicted RBP12.61□□□□□ -0.39
VAMP2-201ENST00000316509 A0A1W2PQ09 198 aa12.6□□□□□ -0.39
VAMP2-201ENST00000316509 A6NIZ1 184 aa12.6□□□□□ -0.39
VAMP2-201ENST00000316509 PLPP3O14495 311 aa12.6□□□□□ -0.39
VAMP2-201ENST00000316509 CD63P08962 238 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms