RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 LINC01590Q5TEZ4 76 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 TMEM91Q6ZNR0 172 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 SPACA9Q96E40 222 aaPredicted RBP6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 HOXD1Q9GZZ0 328 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 KRCC1Q9NPI7 259 aaPredicted RBP6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 C14orf119Q9NWQ9 140 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 TMEM5Q9Y2B1 443 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 DCAF7P61962 342 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 INAQ16352 499 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 KLHL22Q53GT1 634 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 SPINK14Q6IE38 97 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 ACBD7Q8N6N7 88 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 TOR1AIP2Q8NFQ8 470 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 NR4A3Q92570 626 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 FCGR1BQ92637 280 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 PPP4R1LQ9P1A2 415 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 PADI1Q9ULC6 663 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 NCKAP5O14513 1909 aa6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 COL5A1P20908 1838 aaPredicted RBP6.31□□□□□ -1.4
LYSMD3-201ENST00000315948 NSG1A0A0A6YYJ2 146 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 LOC101059948A0A1B0GTJ6 334 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 PINLYPA6NC86 204 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 A6NL46 340 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 C9J4A7 227 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 RGS5O15539 181 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 NPIPB7O75200 414 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 TRIM3O75382 744 aaPredicted RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 SLC25A12O75746 678 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 CTLA4P16410 223 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 TGM1P22735 817 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 NANOS3P60323 173 aaKnown RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 LGALS3BPQ08380 585 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 TCF15Q12870 199 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 MLLT11Q13015 90 aaPredicted RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 HNRNPA0Q13151 305 aaKnown RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 DCTN2Q13561 401 aaKnown RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 ZNF528Q3MIS6 628 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 DPY19L4Q7Z388 723 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 GPAT4Q86UL3 456 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 OR6Q1Q8NGQ2 317 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 NUBPLQ8TB37 319 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 PMM1Q92871 262 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 RFKQ969G6 155 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 CRELD1Q96HD1 420 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 ALG12Q9BV10 488 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 FKRPQ9H9S5 495 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 AKIP1Q9NQ31 210 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 EXOSC3Q9NQT5 275 aaKnown RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 GALNT8Q9NY28 637 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 PLA2G3Q9NZ20 509 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 KLHL13Q9P2N7 655 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 GNG8Q9UK08 70 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 EXOGQ9Y2C4 368 aaKnown RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 HIF3AQ9Y2N7 669 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 ACACAQ13085 2346 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 METTL15A6NJ78 407 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 TNFSF15O95150 251 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 OR8G3PP0DMU2 310 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 CPEP16870 476 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 PGCP20142 388 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 PSMA1P25786 263 aaKnown RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 FOLR3P41439 243 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 TOMM20Q15388 145 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 DMRTC1Q5HYR2 192 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 CARD17Q5XLA6 110 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 VASH2Q86V25 355 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 RNF166Q96A37 237 aaPredicted RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 DEPPQ9NTK1 212 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 MRPS18AQ9NVS2 196 aaKnown RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 MRTO4Q9UKD2 239 aaKnown RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 CLEC4AQ9UMR7 237 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 WIF1Q9Y5W5 379 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 OR6C76A6NM76 312 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 MT-CO3P00414 261 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 CD14P08571 375 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 PNMTP11086 282 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 CCKBRP32239 447 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 MFAP5Q13361 173 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 KRR1Q13601 381 aaKnown RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 C1DQ13901 141 aaKnown RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 ZNF404Q494X3 552 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 C16orf87Q6PH81 154 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 CORO6Q6QEF8 472 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 DPY19L2P2Q6ZN68 376 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 ZNF227Q86WZ6 799 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 OR10AC1Q8NH08 325 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 TMEM9BQ9NQ34 198 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 CHCHD3Q9NX63 227 aaKnown RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 GRHPRQ9UBQ7 328 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 PPIEQ9UNP9 301 aaKnown RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 TMEM129A0AVI4 362 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 MS4A18H0YCH9 400 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 WISP2O76076 250 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 GP1BAP07359 652 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 ZNF806P0C7X5 589 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 IFNGR1P15260 489 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 POU3F1Q03052 451 aaPredicted RBP6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 CD300CQ08708 224 aa6.3□□□□□ -1.4
LYSMD3-201ENST00000315948 MYBPHQ13203 477 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms