RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PELI1Q96FA3 418 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 PGLYRP3Q96LB9 341 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 DEFB126Q9BYW3 111 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 NDEL1Q9GZM8 345 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 PPIL3Q9H2H8 161 aaKnown RBP16.61■□□□□ 0.25
CCDC43-201ENST00000315286 NCDNQ9UBB6 729 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 ST6GALNAC2Q9UJ37 374 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 HRH3Q9Y5N1 445 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 V9GYH0 126 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 LOC102723996A0A087X1L8 192 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 ISPDA4D126 451 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 GP1BAP07359 652 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 UMODP07911 640 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 HTR3AP46098 478 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 CAPZA2P47755 286 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 ACTA2P62736 377 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 ACTG2P63267 376 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 SGCBQ16585 318 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 ZNF528Q3MIS6 628 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 GPR139Q6DWJ6 353 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 ARSKQ6UWY0 536 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 OR10G3Q8NGC4 313 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 ABHD4Q8TB40 342 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 STK35Q8TDR2 534 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 ELP5Q8TE02 316 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 KCNN2Q9H2S1 579 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 SLC39A1Q9NY26 324 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 KLRF1Q9NZS2 232 aa16.61■□□□□ 0.25
CCDC43-201ENST00000315286 PTRH2Q9Y3E5 179 aaKnown RBP16.61■□□□□ 0.25
CCDC43-201ENST00000315286 KLF7O75840 302 aaPredicted RBP16.6■□□□□ 0.25
CCDC43-201ENST00000315286 AHCYP23526 432 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 F8A1P23610 371 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 GRPRP30550 384 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 BTBD16Q32M84 506 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 OR6V1Q8N148 313 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 ST8SIA1Q92185 356 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 AP3S1Q92572 193 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 GHSRQ92847 366 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 WDR70Q9NW82 654 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 RHBDL2Q9NX52 303 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 MOKQ9UQ07 419 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 OGG1O15527 345 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 ARHGEF9O43307 516 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 SNX4O95219 450 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 PTGDSP41222 190 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 FAM27D1Q5T7N8 215 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 MINDY2Q8NBR6 621 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 SNRNP27Q8WVK2 155 aaKnown RBP16.6■□□□□ 0.25
CCDC43-201ENST00000315286 RASL10BQ96S79 203 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 RNF32Q9H0A6 362 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 INIPQ9NRY2 104 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 GNG8Q9UK08 70 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 VDAC3Q9Y277 283 aa16.6■□□□□ 0.25
CCDC43-201ENST00000315286 DXOO77932 396 aaKnown RBP16.59■□□□□ 0.25
CCDC43-201ENST00000315286 AHSA1O95433 338 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 PLGP00747 810 aaPredicted RBP16.59■□□□□ 0.25
CCDC43-201ENST00000315286 CELA2AP08217 269 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 FBXO45P0C2W1 286 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 ZNF883P0CG24 379 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 SHC1P29353 583 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 TMED10P49755 219 aaKnown RBP16.59■□□□□ 0.25
CCDC43-201ENST00000315286 GBX2P52951 348 aaPredicted RBP16.59■□□□□ 0.25
CCDC43-201ENST00000315286 SUMO3P55854 103 aaPredicted RBP16.59■□□□□ 0.25
CCDC43-201ENST00000315286 SIRPAP78324 504 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 ANGPT1Q15389 498 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 TRAM1Q15629 374 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 ZMAT1Q5H9K5 638 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 DDI2Q5TDH0 399 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 ZNF517Q6ZMY9 492 aaPredicted RBP16.59■□□□□ 0.25
CCDC43-201ENST00000315286 CEACAM19Q7Z692 300 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 GALNT6Q8NCL4 622 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 SLC22A8Q8TCC7 542 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 THAP4Q8WY91 577 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 SYT4Q9H2B2 425 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 ACOXLQ9NUZ1 547 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 COL27A1Q8IZC6 1860 aaPredicted RBP16.59■□□□□ 0.25
CCDC43-201ENST00000315286 EML6Q6ZMW3 1958 aa16.59■□□□□ 0.25
CCDC43-201ENST00000315286 IGHV1-45A0A0A0MS14 117 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 FUOMA2VDF0 154 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 PRR32B1ATL7 298 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 C9J4A7 227 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 RENP00797 406 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 MTNR1BP49286 362 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 ZNF79Q15937 498 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 SLC6A19Q695T7 634 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 NR2C2APQ86WQ0 139 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 POC5Q8NA72 575 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 OR13C5Q8NGS8 318 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 OR2T4Q8NH00 348 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 ATF6BQ99941 703 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 C14orf119Q9NWQ9 140 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 ETAA1Q9NY74 926 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 COMMD3Q9UBI1 195 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 TRAPPC4Q9Y296 219 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 B3GALT1Q9Y5Z6 326 aa16.58■□□□□ 0.25
CCDC43-201ENST00000315286 A0A1W2PRG6 482 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 LNP1A1A4G5 178 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 FTCDNL1E5RQL4 147 aa16.58■□□□□ 0.24
CCDC43-201ENST00000315286 PSMD9O00233 223 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms