RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 C7orf34Q96L11 122 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 COL24A1Q17RW2 1714 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 PRAMEF27A3QJZ7 478 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 CAPNS1P04632 268 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 CDK4P11802 303 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 APOBEC1P41238 236 aaKnown RBP12.43□□□□□ -0.42
RFFL-201ENST00000315249 PRSS48Q7RTY5 328 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 IER2Q9BTL4 223 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 GNG12Q9UBI6 72 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 A6NIN4 97 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 NKX6-3A6NJ46 265 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 K7EQS6 105 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 MAKP20794 623 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 LAIR1Q6GTX8 287 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 TCTN3Q6NUS6 607 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 PGAP1Q75T13 922 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 CA13Q8N1Q1 262 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 SYNPRQ8TBG9 265 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 TMEM163Q8TC26 289 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 MMP27Q9H306 513 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 H2AFB2P0C5Z0 115 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 EIF3IQ13347 325 aaKnown RBP12.43□□□□□ -0.42
RFFL-201ENST00000315249 FAM76BQ5HYJ3 339 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 BAIAP2L2Q6UXY1 529 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 RASD2Q96D21 266 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 MVB12AQ96EY5 273 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 CYB5BO43169 146 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 ALDOBP05062 364 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 NDUFB7P17568 137 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 TSPAN31Q12999 210 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 TMEM215Q68D42 235 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 PXKQ7Z7A4 578 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 CA5BP1Q8WTZ4 195 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 STACQ99469 402 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 SHANK3Q9BYB0 1731 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 SPAARA0A1B0GVQ0 90 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 PMS2P1A4D2B8 440 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 BTBD17A6NE02 478 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 METTL15A6NJ78 407 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 NHSL2Q5HYW2 709 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 PRSS36Q5K4E3 855 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 FAM69AQ5T7M9 428 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 PFN4Q8NHR9 129 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 NDNFQ8TB73 568 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 CPPED1Q9BRF8 314 aaPredicted RBP12.42□□□□□ -0.42
RFFL-201ENST00000315249 NT5DC2Q9H857 520 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 BET1O15155 118 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 GSTP1P09211 210 aaKnown RBP12.42□□□□□ -0.42
RFFL-201ENST00000315249 FZD2Q14332 565 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 FAM71E1Q6IPT2 247 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 OR11G2Q8NGC1 345 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 ZFP90Q8TF47 636 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 C20orf27Q9GZN8 174 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 UFSP2Q9NUQ7 469 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 HRH3Q9Y5N1 445 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 PLXNA1Q9UIW2 1896 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 A0A1B0GV50 99 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 LILRA5A6NI73 299 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 SSX5O60225 188 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 PRKAR1BP31321 381 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 ARL6IP1Q15041 203 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 PLAG1Q6DJT9 500 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 LILRB2Q8N423 598 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.42□□□□□ -0.42
RFFL-201ENST00000315249 C16orf52Q8NHV5 167 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 MGAT4CQ9UBM8 478 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 TSPAN9O75954 239 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 CRHBPP24387 322 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 KIR2DL3P43628 341 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 IDH3GP51553 393 aaPredicted RBP12.42□□□□□ -0.42
RFFL-201ENST00000315249 NCS1P62166 190 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 ZNF766Q5HY98 468 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 BEST3Q8N1M1 668 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 ZNF431Q8TF32 576 aaPredicted RBP12.42□□□□□ -0.42
RFFL-201ENST00000315249 ARSGQ96EG1 525 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 BORCS7-ASMTA0A0B4J1R7 106 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 FAM90A27PA6NNH2 459 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 PRKYO43930 277 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 TOXO94900 526 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 RPS18P62269 152 aaKnown RBP12.42□□□□□ -0.42
RFFL-201ENST00000315249 TAS2R8Q9NYW2 309 aa12.42□□□□□ -0.42
RFFL-201ENST00000315249 PATE3B3GLJ2 98 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 NFYBP25208 207 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 GDF7Q7Z4P5 450 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 MAML2Q8IZL2 1156 aaPredicted RBP12.41□□□□□ -0.42
RFFL-201ENST00000315249 OR6T1Q8NGN1 323 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 PRR7Q8TB68 274 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 FNDC8Q8TC99 324 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 ABCG5Q9H222 651 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 TP63Q9H3D4 680 aaPredicted RBP12.41□□□□□ -0.42
RFFL-201ENST00000315249 A4GALTQ9NPC4 353 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 A0A1W2PQL4 384 aaPredicted RBP12.41□□□□□ -0.42
RFFL-201ENST00000315249 FOLR1P15328 257 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 FAM53BQ14153 422 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 OR1C1Q15619 314 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 C6orf89Q6UWU4 347 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 ACBD4Q8NC06 268 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 SLC25A43Q8WUT9 341 aaPredicted RBP12.41□□□□□ -0.42
RFFL-201ENST00000315249 PIGBOS1A0A0B4J2F0 54 aa12.41□□□□□ -0.42
RFFL-201ENST00000315249 MCRIP1C9JLW8 97 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms