RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 ANXA2P2A6NMY6 339 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 HSPB2A8KAH6 182 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 H0YGG7 62 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 XRCC3O43542 346 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 CBX7O95931 251 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 ANXA2P07355 339 aaKnown RBP12.66□□□□□ -0.38
MKS1-201ENST00000313863 APEHP13798 732 aaKnown RBP12.66□□□□□ -0.38
MKS1-201ENST00000313863 DCTDP32321 178 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 ARF3P61204 181 aaPredicted RBP12.66□□□□□ -0.38
MKS1-201ENST00000313863 CTAG1AP78358 180 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 SSBP1Q04837 148 aaKnown RBP12.66□□□□□ -0.38
MKS1-201ENST00000313863 ALKBH1Q13686 389 aaKnown RBP12.66□□□□□ -0.38
MKS1-201ENST00000313863 HSPB2Q16082 182 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 ZNF684Q5T5D7 378 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 OR5M10Q6IEU7 315 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 ZAR1Q86SH2 424 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 CA13Q8N1Q1 262 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 GCDHQ92947 438 aaPredicted RBP12.66□□□□□ -0.38
MKS1-201ENST00000313863 TRIM43Q96BQ3 446 aaPredicted RBP12.66□□□□□ -0.38
MKS1-201ENST00000313863 WBP1Q96G27 269 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 ALG12Q9BV10 488 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 TWSG1Q9GZX9 223 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 TRPV4Q9HBA0 871 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 SCML1Q9UN30 329 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 ADAM18Q9Y3Q7 739 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 PCDHGA5Q9Y5G8 931 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 KCNMB2Q9Y691 235 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 NUP210LQ5VU65 1888 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 TRBV5-5A0A0J9YX44 114 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 OR6C68A6NDL8 312 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 F5H5P2 479 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 H7C417 338 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 TSPAN4O14817 238 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 DNAJB6O75190 326 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 MTRF1O75570 445 aaKnown RBP12.65□□□□□ -0.38
MKS1-201ENST00000313863 AQP8O94778 261 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 IGF2P01344 180 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 NMBP08949 121 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 CT62P0C5K7 136 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 GRK6P43250 576 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 MAP2K6P52564 334 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 RAB38P57729 211 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 TCEA2Q15560 299 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 HSD17B13Q7Z5P4 300 aaPredicted RBP12.65□□□□□ -0.38
MKS1-201ENST00000313863 C7orf57Q8NEG2 295 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 ASB12Q8WXK4 309 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 RGP1Q92546 391 aaPredicted RBP12.65□□□□□ -0.38
MKS1-201ENST00000313863 GINS4Q9BRT9 223 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 COMMD4Q9H0A8 199 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 GDE1Q9NZC3 331 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 MTFP1Q9UDX5 166 aa12.65□□□□□ -0.38
MKS1-201ENST00000313863 A8MXK9 166 aa12.65□□□□□ -0.39
MKS1-201ENST00000313863 IMPA2O14732 288 aa12.65□□□□□ -0.39
MKS1-201ENST00000313863 NARSO43776 548 aaKnown RBP12.65□□□□□ -0.39
MKS1-201ENST00000313863 CLDN12P56749 244 aa12.65□□□□□ -0.39
MKS1-201ENST00000313863 NANOS3P60323 173 aaKnown RBP12.65□□□□□ -0.39
MKS1-201ENST00000313863 RPS4XP62701 263 aaKnown RBP12.65□□□□□ -0.39
MKS1-201ENST00000313863 SNRPNP63162 240 aaKnown RBP12.65□□□□□ -0.39
MKS1-201ENST00000313863 LTBQ06643 244 aa12.65□□□□□ -0.39
MKS1-201ENST00000313863 PCGF3Q3KNV8 242 aa12.65□□□□□ -0.39
MKS1-201ENST00000313863 LEG1Q6P5S2 330 aa12.65□□□□□ -0.39
MKS1-201ENST00000313863 TMEM81Q6P7N7 255 aa12.65□□□□□ -0.39
MKS1-201ENST00000313863 ARSKQ6UWY0 536 aa12.65□□□□□ -0.39
MKS1-201ENST00000313863 SLC36A1Q7Z2H8 476 aa12.65□□□□□ -0.39
MKS1-201ENST00000313863 PDZD9Q8IXQ8 264 aa12.65□□□□□ -0.39
MKS1-201ENST00000313863 ADAD1Q96M93 576 aaKnown RBP12.65□□□□□ -0.39
MKS1-201ENST00000313863 SHARPINQ9H0F6 387 aa12.65□□□□□ -0.39
MKS1-201ENST00000313863 CAPN10Q9HC96 672 aa12.65□□□□□ -0.39
MKS1-201ENST00000313863 COQ3Q9NZJ6 369 aa12.65□□□□□ -0.39
MKS1-201ENST00000313863 STEAP1Q9UHE8 339 aa12.65□□□□□ -0.39
MKS1-201ENST00000313863 OPN4Q9UHM6 478 aa12.65□□□□□ -0.39
MKS1-201ENST00000313863 TBC1D3DA0A087WVF3 549 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 TBC1D3LB9A6J9 549 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 SCAMP1O15126 338 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 ARPC5O15511 151 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 TBC1D3HP0C7X1 549 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 GABRA1P14867 456 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 ITPKBP27987 946 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 ERVK-25P63136 954 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 C2orf27AQ580R0 203 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 TBC1D3CQ6IPX1 549 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 GSG1LQ6UXU4 331 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 TMPRSS12Q86WS5 348 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 YAF2Q8IY57 180 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 ZNF595Q8IYB9 648 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 TBC1D3Q8IZP1 549 aaPredicted RBP12.64□□□□□ -0.39
MKS1-201ENST00000313863 EIF4E3Q8N5X7 224 aaKnown RBP12.64□□□□□ -0.39
MKS1-201ENST00000313863 TMEM52Q8NDY8 209 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 OR6M1Q8NGM8 313 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 OR6N1Q8NGY5 312 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 OR10G6Q8NH81 332 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 COQ8AQ8NI60 647 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 FGF13Q92913 245 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 ANKRD9Q96BM1 317 aaPredicted RBP12.64□□□□□ -0.39
MKS1-201ENST00000313863 RASD2Q96D21 266 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 TOE1Q96GM8 510 aaKnown RBP12.64□□□□□ -0.39
MKS1-201ENST00000313863 KLHL15Q96M94 604 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 LINC00052Q96N35 136 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 ARL6Q9H0F7 186 aa12.64□□□□□ -0.39
MKS1-201ENST00000313863 Q9N2J8 555 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms