RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CORINQ9Y5Q5 1042 aa12.76□□□□□ -0.37
PPP1CA-201ENST00000312989 TRIM64A6NGJ6 449 aa12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 TRIM64BA6NI03 449 aa12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 PLPP3O14495 311 aa12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 ZNF43P17038 809 aa12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 PTAFRP25105 342 aa12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 SEC24CP53992 1094 aa12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 RPS4XP62701 263 aaKnown RBP12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 ZNF74Q16587 644 aa12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 TMEM108Q6UXF1 575 aa12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 DNM1P46Q6ZS02 220 aa12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 SLC46A3Q7Z3Q1 461 aa12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 YTHDF3Q7Z739 585 aaKnown RBP12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 RP9Q8TA86 221 aaKnown RBP12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 MAGEE2Q8TD90 523 aaPredicted RBP12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 TMEM171Q8WVE6 324 aa12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 TXNDC15Q96J42 360 aa12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 GRIP2Q9C0E4 1043 aa12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 CRNNQ9UBG3 495 aaPredicted RBP12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 SLC13A4Q9UKG4 626 aa12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 SLC7A7Q9UM01 511 aa12.75□□□□□ -0.37
PPP1CA-201ENST00000312989 ARPC4-TTLL3A0A0A6YYG9 625 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 IGHV1-18A0A0C4DH31 117 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 TRAPPC13A5PLN9 417 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 NME4O00746 187 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 COX4I1P13073 169 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 KDELR2P33947 212 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 CDH11P55287 796 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 ROR2Q01974 943 aaKnown RBP12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 MFSD13AQ14CX5 517 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 MMEL1Q495T6 779 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 C1QTNF12Q5T7M4 302 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 ERICH5Q6P6B1 374 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 MYPOPQ86VE0 399 aaPredicted RBP12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 CARM1Q86X55 608 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 C20orf196Q8IYI0 205 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 LRRC17Q8N6Y2 441 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 ANKK1Q8NFD2 765 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 C18orf12Q96KH6 178 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 Q96MF0 132 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 EPYCQ99645 322 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 ECSITQ9BQ95 431 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 SEC61A2Q9H9S3 476 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 MED29Q9NX70 200 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 TAS2R5Q9NYW4 299 aa12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 CISD1Q9NZ45 108 aaKnown RBP12.74□□□□□ -0.37
PPP1CA-201ENST00000312989 OR6C65A6NJZ3 312 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 ZNF587BE7ETH6 402 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 M0R1B8 84 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 SHOX2O60902 331 aaPredicted RBP12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 NDUFS7O75251 213 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 MT-ATP6P00846 226 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 IGLV1-44P01699 117 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 ASAH2BP0C7U1 165 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 CDH2P19022 906 aaPredicted RBP12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 DRD4P21917 467 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 GTF2E2P29084 291 aaKnown RBP12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 CDKN1AP38936 164 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 RIPPLY3P57055 190 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 LSM11P83369 360 aaKnown RBP eCLIP12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 TGFBR3Q03167 851 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 PUDPQ08623 228 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 TSEN54Q7Z6J9 526 aaKnown RBP12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 NKAIN4Q8IVV8 208 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 MICU2Q8IYU8 434 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 PCYOX1LQ8NBM8 494 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 OR2T12Q8NG77 320 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 OR5J2Q8NH18 312 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 RASSF5Q8WWW0 418 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 MPP4Q96JB8 637 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 RADILQ96JH8 1075 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 EMC6Q9BV81 110 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 SLC19A3Q9BZV2 496 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 CXorf56Q9H5V9 222 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 GPR35Q9HC97 309 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 OBP2BQ9NPH6 170 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 GID8Q9NWU2 228 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 SH3GLB1Q9Y371 365 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 USF3Q68DE3 2245 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 DSCAMO60469 2012 aa12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 NIPBLQ6KC79 2804 aaeCLIP12.73□□□□□ -0.37
PPP1CA-201ENST00000312989 ARHGEF9O43307 516 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 IGKV3-15P01624 115 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 TSPAN19P0C672 248 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 HOXB4P17483 251 aaPredicted RBP12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 OR1E2P47887 323 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 UGT2B15P54855 530 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 PRPS1P60891 318 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 TUBA1BP68363 451 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 TUBA4AP68366 448 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 ARF1P84077 181 aaKnown RBP12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 POU3F1Q03052 451 aaPredicted RBP12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 ZP4Q12836 540 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 PIN1Q13526 163 aaPredicted RBP12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 CYBRD1Q53TN4 286 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 TUBA1AQ71U36 451 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 ZNF627Q7L945 461 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 SPATA21Q7Z572 469 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 PXKQ7Z7A4 578 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 UEVLDQ8IX04 471 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms