RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 DSC1Q08554 894 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 CEACAM7Q14002 265 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 SPCS2Q15005 226 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 FRMD1Q8N878 549 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 SEMA4CQ9C0C4 833 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 ZNF264O43296 627 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 THBS1P07996 1170 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 CPMP14384 443 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 GJA5P36382 358 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 TAS2R45P59539 299 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 OR1Q1Q15612 314 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 RTL8BQ17RB0 113 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 LINC00299Q6ZSB3 139 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 SIGLECL1Q8N7X8 197 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 OR1M1Q8NGA1 313 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 OR10J5Q8NHC4 309 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 BET1O15155 118 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 CTRB1P17538 263 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 CTRB2Q6GPI1 263 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 ZNF551Q7Z340 670 aaPredicted RBP14.42□□□□□ -0.1
HCFC1-201ENST00000310441 NLGN4XQ8N0W4 816 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 SGIP1Q9BQI5 828 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 MOB1AQ9H8S9 216 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 IGSF5Q9NSI5 407 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 XCR1P46094 333 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 LETMD1Q6P1Q0 360 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 MFSD6LQ8IWD5 586 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 KHSRPQ92945 711 aaKnown RBP eCLIP14.42□□□□□ -0.1
HCFC1-201ENST00000310441 RTP3Q9BQQ7 232 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 PLEKHF2Q9H8W4 249 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 TM7SF3Q9NS93 570 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 ZNF355PQ9NSJ1 428 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 NXT1Q9UKK6 140 aaKnown RBP14.42□□□□□ -0.1
HCFC1-201ENST00000310441 LAMP3Q9UQV4 416 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 NSG1A0A0A6YYJ2 146 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 OR2C1O95371 312 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 CHRNEQ04844 493 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 GRAMD2AQ8IUY3 354 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 CYB561A3Q8NBI2 242 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 APH1AQ96BI3 265 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 SLAMF7Q9NQ25 335 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 POLR2AP24928 1970 aaKnown RBP14.42□□□□□ -0.1
HCFC1-201ENST00000310441 B4GAT1O43505 415 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 ABOP16442 354 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 BARHL1Q9BZE3 327 aa14.42□□□□□ -0.1
HCFC1-201ENST00000310441 H0Y8G0 127 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 OR7C1O76099 320 aaPredicted RBP14.41□□□□□ -0.1
HCFC1-201ENST00000310441 DPPA2Q7Z7J5 298 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 OR8J2Q8NGG1 315 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 RPH3ALQ9UNE2 315 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 VDAC3Q9Y277 283 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 SDR9C7Q8NEX9 313 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 CLMPQ9H6B4 373 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 ARNTLO00327 626 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 CFHP08603 1231 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 CR2P20023 1033 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 GDF1P27539 372 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 HTR5AP47898 357 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 DPPA4Q7L190 304 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 KLHDC1Q8N7A1 406 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 DNAJA3Q96EY1 480 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 SPACA1Q9HBV2 294 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 CORINQ9Y5Q5 1042 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 SPTBN1Q01082 2364 aaKnown RBP14.41□□□□□ -0.1
HCFC1-201ENST00000310441 KIR2DS1A0A191URI9 304 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 HEPACAM2A8MVW5 462 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 CSF2RAP15509 400 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 KIR2DS4P43632 304 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 NDUFA6P56556 154 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 KIR2DS1Q14954 304 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 IL20RBQ6UXL0 311 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 XYLT2Q9H1B5 865 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 RANGRFQ9HD47 186 aaPredicted RBP14.41□□□□□ -0.1
HCFC1-201ENST00000310441 AJAP1Q9UKB5 411 aaPredicted RBP14.41□□□□□ -0.1
HCFC1-201ENST00000310441 GOLT1BQ9Y3E0 138 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 ABCA1O95477 2261 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 SCN1AP35498 2009 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 TNFRSF4P43489 277 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 MTNR1BP49286 362 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 POU3F1Q03052 451 aaPredicted RBP14.41□□□□□ -0.1
HCFC1-201ENST00000310441 GAB1Q13480 694 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 OR8B8Q15620 311 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 Q499Y3 187 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 MOB3CQ70IA8 216 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 FAM57BQ71RH2 274 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 OR8U1Q8NH10 309 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 C20orf85Q9H1P6 137 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 RIMS4Q9H426 269 aaPredicted RBP14.41□□□□□ -0.1
HCFC1-201ENST00000310441 OR52A1Q9UKL2 312 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 NPFFR2Q9Y5X5 522 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 YKT6O15498 198 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 LALBAP00709 142 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 BPIFB3P59826 476 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 FCRLBQ6BAA4 426 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 PSAPL1Q6NUJ1 521 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 LYPD4Q6UWN0 246 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 APIPQ96GX9 242 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 POFUT1Q9H488 388 aa14.41□□□□□ -0.1
HCFC1-201ENST00000310441 DDX31Q9H8H2 851 aaKnown RBP14.41□□□□□ -0.1
HCFC1-201ENST00000310441 TCRBV3S1A0A5B6 114 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms