RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 EPYCQ99645 322 aa17.02■□□□□ 0.32
LIME1-201ENST00000309546 ASPNQ9BXN1 380 aa17.02■□□□□ 0.32
LIME1-201ENST00000309546 NELFAQ9H3P2 528 aa17.02■□□□□ 0.32
LIME1-201ENST00000309546 ZNF385DQ9H6B1 395 aa17.02■□□□□ 0.32
LIME1-201ENST00000309546 ABCA2Q9BZC7 2435 aa17.02■□□□□ 0.32
LIME1-201ENST00000309546 ABCA1O95477 2261 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 A0A087WUJ7 227 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 ARPC4-TTLL3A0A0A6YYG9 625 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 A0A0G2JND7 137 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 H7C417 338 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 TPST2O60704 377 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 FZD7O75084 574 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 ZNF432O94892 652 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 MFN2O95140 757 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 CRYAAP02489 173 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 CDH12P55289 794 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 ARF1P84077 181 aaKnown RBP17.01■□□□□ 0.31
LIME1-201ENST00000309546 CEACAM16Q2WEN9 425 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 VHLLQ6RSH7 139 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 STON2Q8WXE9 905 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 ANKRD27Q96NW4 1050 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 CGREF1Q99674 301 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 MCHR1Q99705 422 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 VIPAS39Q9H9C1 493 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 PMF1-BGLAPU3KQ54 211 aa17.01■□□□□ 0.31
LIME1-201ENST00000309546 KIAA1324LA8MWY0 1029 aaPredicted RBP17■□□□□ 0.31
LIME1-201ENST00000309546 TRAF3IP2O43734 574 aaPredicted RBP17■□□□□ 0.31
LIME1-201ENST00000309546 EDF1O60869 148 aaKnown RBP17■□□□□ 0.31
LIME1-201ENST00000309546 SEC14L2O76054 403 aa17■□□□□ 0.31
LIME1-201ENST00000309546 HPRP00739 348 aa17■□□□□ 0.31
LIME1-201ENST00000309546 BGLAPP02818 100 aa17■□□□□ 0.31
LIME1-201ENST00000309546 CECR9P0C854 216 aa17■□□□□ 0.31
LIME1-201ENST00000309546 CAPZA2P47755 286 aa17■□□□□ 0.31
LIME1-201ENST00000309546 PCBP3P57721 371 aaKnown RBP17■□□□□ 0.31
LIME1-201ENST00000309546 POU3F1Q03052 451 aaPredicted RBP17■□□□□ 0.31
LIME1-201ENST00000309546 MFSD13AQ14CX5 517 aa17■□□□□ 0.31
LIME1-201ENST00000309546 ARFGEF3Q5TH69 2177 aa17■□□□□ 0.31
LIME1-201ENST00000309546 DPP10Q8N608 796 aa17■□□□□ 0.31
LIME1-201ENST00000309546 ADPRHL1Q8NDY3 354 aa17■□□□□ 0.31
LIME1-201ENST00000309546 PIK3C3Q8NEB9 887 aa17■□□□□ 0.31
LIME1-201ENST00000309546 MAGEE2Q8TD90 523 aaPredicted RBP17■□□□□ 0.31
LIME1-201ENST00000309546 MOGAT1Q96PD6 335 aa17■□□□□ 0.31
LIME1-201ENST00000309546 ZNF317Q96PQ6 595 aaPredicted RBP17■□□□□ 0.31
LIME1-201ENST00000309546 OR2M2Q96R28 347 aa17■□□□□ 0.31
LIME1-201ENST00000309546 KATNB1Q9BVA0 655 aa17■□□□□ 0.31
LIME1-201ENST00000309546 EVA1AQ9H8M9 152 aa17■□□□□ 0.31
LIME1-201ENST00000309546 SEC61A2Q9H9S3 476 aa17■□□□□ 0.31
LIME1-201ENST00000309546 CRLF2Q9HC73 371 aa17■□□□□ 0.31
LIME1-201ENST00000309546 GPR35Q9HC97 309 aa17■□□□□ 0.31
LIME1-201ENST00000309546 YAE1D1Q9NRH1 226 aa17■□□□□ 0.31
LIME1-201ENST00000309546 CORINQ9Y5Q5 1042 aa17■□□□□ 0.31
LIME1-201ENST00000309546 CPSF4LA6NMK7 179 aaKnown RBP16.99■□□□□ 0.31
LIME1-201ENST00000309546 LRRN3E7EW58 273 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 RPL36A-HNRNPH2H7BZ11 118 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 M0QX08 132 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 M0R3G1 203 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 CD5LO43866 347 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 SERPINI2O75830 405 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 LY6HO94772 140 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 HLA-DOBP13765 273 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 PAX7P23759 505 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 DSCR9P59020 149 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 SNRPD2P62316 118 aaKnown RBP16.99■□□□□ 0.31
LIME1-201ENST00000309546 NAAAQ02083 359 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 RBBP4Q09028 425 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 PMS2P3Q13401 168 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 OR10H5Q8NGA6 315 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 VANGL1Q8TAA9 524 aaPredicted RBP16.99■□□□□ 0.31
LIME1-201ENST00000309546 FAM168AQ92567 244 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 ZNF837Q96EG3 531 aaPredicted RBP16.99■□□□□ 0.31
LIME1-201ENST00000309546 EMC6Q9BV81 110 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 MED29Q9NX70 200 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 ADAM21Q9UKJ8 722 aa16.99■□□□□ 0.31
LIME1-201ENST00000309546 JMJD1CQ15652 2540 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 MS4A18H0YCH9 400 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 GPRIN2O60269 458 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 CRLF1O75462 422 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 CELA3BP08861 270 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 H2AFXP16104 143 aaPredicted RBP16.98■□□□□ 0.31
LIME1-201ENST00000309546 IDH3GP51553 393 aaPredicted RBP16.98■□□□□ 0.31
LIME1-201ENST00000309546 EFNA4P52798 201 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 NPRL3Q12980 569 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 DUSP7Q16829 419 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 MS4A18Q3C1V0 323 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 PHYHD1Q5SRE7 291 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 TMEM123Q8N131 208 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 SCAIQ8N9R8 606 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 GPR32P1Q8NGA4 272 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 OR6S1Q8NH40 331 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 SLC41A3Q96GZ6 507 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 ARHGDIGQ99819 225 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 SIKE1Q9BRV8 207 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 TMEM120AQ9BXJ8 343 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 CA10Q9NS85 328 aa16.98■□□□□ 0.31
LIME1-201ENST00000309546 CRNNQ9UBG3 495 aaPredicted RBP16.98■□□□□ 0.31
LIME1-201ENST00000309546 ANK3Q12955 4377 aaKnown RBP16.98■□□□□ 0.31
LIME1-201ENST00000309546 SONP18583 2426 aaKnown RBP16.97■□□□□ 0.31
LIME1-201ENST00000309546 LOC102725191A0A1B0GVB3 256 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 TLX2O43763 284 aaPredicted RBP16.97■□□□□ 0.31
LIME1-201ENST00000309546 HOXB1P14653 301 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms