RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 TOE1Q96GM8 510 aaKnown RBP11.65□□□□□ -0.54
RETREG3-201ENST00000309428 AHCYL2Q96HN2 611 aaKnown RBP11.65□□□□□ -0.54
RETREG3-201ENST00000309428 METTL2AQ96IZ6 378 aaKnown RBP11.65□□□□□ -0.54
RETREG3-201ENST00000309428 CNN2Q99439 309 aaKnown RBP11.65□□□□□ -0.54
RETREG3-201ENST00000309428 SLC38A3Q99624 504 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 DHCR7Q9UBM7 475 aaKnown RBP11.65□□□□□ -0.54
RETREG3-201ENST00000309428 LAMP5Q9UJQ1 280 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 TRAPPC13A5PLN9 417 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 M0QYG6 137 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 FADS1O60427 444 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 DCNP07585 359 aaKnown RBP11.65□□□□□ -0.54
RETREG3-201ENST00000309428 CT62P0C5K7 136 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 DRD2P14416 443 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 ST6GAL1P15907 406 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 HTR1FP30939 366 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 MTNR1BP49286 362 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 DLX5P56178 289 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 PCBP4P57723 403 aaKnown RBP11.65□□□□□ -0.54
RETREG3-201ENST00000309428 BTG1P62324 171 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 EIPR1Q53HC9 387 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 KCTD20Q7Z5Y7 419 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 CMTM4Q8IZR5 234 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 NMNAT3Q96T66 252 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 TEAD3Q99594 435 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 TSPAN10Q9H1Z9 355 aaPredicted RBP11.65□□□□□ -0.54
RETREG3-201ENST00000309428 PPP1R3EQ9H7J1 279 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 GBF1Q92538 1859 aa11.65□□□□□ -0.54
RETREG3-201ENST00000309428 TPRP12270 2363 aaKnown RBP11.65□□□□□ -0.54
RETREG3-201ENST00000309428 A0A0A6YYD5 115 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 IDSB3KWA1 339 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 XKRYO14609 159 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 TO15178 435 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 LGI1O95970 557 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 SLC6A1P30531 599 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 AIMP2Q13155 320 aaKnown RBP11.65□□□□□ -0.55
RETREG3-201ENST00000309428 CDNFQ49AH0 187 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 KRBOX4Q5JUW0 171 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 DCST2Q5T1A1 773 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 LAMTOR1Q6IAA8 161 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 ZNF836Q6ZNA1 936 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.65□□□□□ -0.55
RETREG3-201ENST00000309428 PMM1Q92871 262 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 MRGPRX1Q96LB2 322 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 FAM60AQ9NP50 221 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 DLL4Q9NR61 685 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 ZSCAN32Q9NX65 697 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 CPNE7Q9UBL6 633 aa11.65□□□□□ -0.55
RETREG3-201ENST00000309428 FRMPD3Q5JV73 1810 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 CCDC85CA6NKD9 419 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 SEMG1P04279 462 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 PGAM2P15259 253 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 PRKXP51817 358 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 FOXK2Q01167 660 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 FGL1Q08830 312 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 OR1Q1Q15612 314 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 FBXO42Q6P3S6 717 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 LEG1Q6P5S2 330 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 TMEM65Q6PI78 240 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 TTLL10Q6ZVT0 673 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 TMEM17Q86X19 198 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 KDM8Q8N371 416 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 TTLQ8NG68 377 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 OR2L8Q8NGY9 312 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 C1QTNF2Q9BXJ5 285 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 HRH4Q9H3N8 390 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 A4GALTQ9NPC4 353 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 CKLFQ9UBR5 152 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 ZNF443Q9Y2A4 671 aaPredicted RBP11.64□□□□□ -0.55
RETREG3-201ENST00000309428 SLC6A5Q9Y345 797 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 SIRT4Q9Y6E7 314 aaPredicted RBP11.64□□□□□ -0.55
RETREG3-201ENST00000309428 HELZP42694 1942 aaKnown RBP11.64□□□□□ -0.55
RETREG3-201ENST00000309428 DENND4CQ5VZ89 1909 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 TMEM72A0PK05 275 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 SGCEO43556 437 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 THSD4Q6ZMP0 1018 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 OR51D1Q8NGF3 324 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 ZFYVE21Q9BQ24 234 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 PARP12Q9H0J9 701 aaKnown RBP11.64□□□□□ -0.55
RETREG3-201ENST00000309428 CYSLTR2Q9NS75 346 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 CD207Q9UJ71 328 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 MCIDASD6RGH6 385 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 CDC40O60508 579 aaKnown RBP eCLIP11.64□□□□□ -0.55
RETREG3-201ENST00000309428 SELENOFO60613 162 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 SCGB1D2O95969 90 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 HSD17B2P37059 387 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 LSSP48449 732 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 ELOAQ14241 798 aaKnown RBP11.64□□□□□ -0.55
RETREG3-201ENST00000309428 MFSD12Q6NUT3 480 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 BTN2A1Q7KYR7 527 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 SLC51BQ86UW2 128 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 ZNF227Q86WZ6 799 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 GTPBP8Q8N3Z3 284 aaPredicted RBP11.64□□□□□ -0.55
RETREG3-201ENST00000309428 DUSP18Q8NEJ0 188 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 GPER1Q99527 375 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 HDAC8Q9BY41 377 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 EPHX3Q9H6B9 360 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 METTL8Q9H825 291 aaKnown RBP11.64□□□□□ -0.55
RETREG3-201ENST00000309428 V9GY05 133 aa11.64□□□□□ -0.55
RETREG3-201ENST00000309428 SEMA4FO95754 770 aa11.63□□□□□ -0.55
RETREG3-201ENST00000309428 CYB5AP00167 134 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms