RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 RNF113BQ8IZP6 322 aaKnown RBP9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 METTL27Q8N6F8 245 aaPredicted RBP9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 CSNK1A1LQ8N752 337 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR6C4Q8NGE1 309 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 ELP5Q8TE02 316 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 DNASE2BQ8WZ79 361 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 GAL3ST3Q96A11 431 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 C16orf58Q96GQ5 468 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 CMTM3Q96MX0 182 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 MCHR1Q99705 422 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 NDC1Q9BTX1 674 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 LRRN3Q9H3W5 708 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 SLC6A5Q9Y345 797 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 A0A1B0GVC2 190 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 PMS2P1A4D2B8 440 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 A6NIN4 97 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 LMO7DNF2Z398 122 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZNF593O00488 134 aaPredicted RBP9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 PRAF2O60831 178 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 PEX14O75381 377 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 CD3GP09693 182 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 RAB3BP20337 219 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 GCGRP47871 477 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 VEGFCP49767 419 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 RGS8P57771 180 aaPredicted RBP9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 KCNAB1Q14722 419 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 HFEQ30201 348 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 SLC25A35Q3KQZ1 300 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 PLBD1Q6P4A8 553 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 ARL9Q6T311 187 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 FAM198BQ6UWH4 519 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 RHOUQ7L0Q8 258 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 BMPERQ8N8U9 685 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 OR9A2Q8NGT5 310 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 SCARB1Q8WTV0 552 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZDHHC12Q96GR4 267 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 LCORQ96JN0 433 aaPredicted RBP9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 LRIT1Q9P2V4 623 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 CES1P1Q9UKY3 287 aa9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 PCDHGA9Q9Y5G4 932 aaKnown RBP9.46□□□□□ -0.9
APOBEC3F-201ENST00000308521 IGHV5-51A0A0C4DH38 117 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 UNC119BA6NIH7 251 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 G3V3Q6 166 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 PIP5K1CO60331 668 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 RAD1O60671 282 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 NMBP08949 121 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 LCN1P31025 176 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 FASLGP48023 281 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 NRG3P56975 720 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZP1P60852 638 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 DGCR2P98153 550 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 MAPK14Q16539 360 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 CCDC157Q569K6 752 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 FAM69AQ5T7M9 428 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 SLC48A1Q6P1K1 146 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 NLRC3Q7RTR2 1065 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 SLITRK4Q8IW52 837 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 FAM98AQ8NCA5 519 aaKnown RBP9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 TMEM52Q8NDY8 209 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 DMBX1Q8NFW5 382 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 OR9A4Q8NGU2 314 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 OR2I1PQ8NGU4 316 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 NT5CQ8TCD5 201 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 TMEM255BQ8WV15 326 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 KISS1RQ969F8 398 aaPredicted RBP9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZG16BQ96DA0 208 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 ART5Q96L15 291 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 TWSG1Q9GZX9 223 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 DUSP15Q9H1R2 295 aaPredicted RBP9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 PRDM9Q9NQV7 894 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 SLC22A31A6NKX4 558 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 FAM183AA6NL82 134 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 RHPN2P1A8MT19 583 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 BHLHE40O14503 412 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 CDC42EP2O14613 210 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 SGCEO43556 437 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 SSNA1O43805 119 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 CDC123O75794 336 aaPredicted RBP9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 CFDP00746 253 aaPredicted RBP9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZGLP1P0C6A0 271 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 SMIM10L1P0DMW3 83 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 SFTPCP11686 197 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 TBXA2RP21731 343 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 SSTR2P30874 369 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 RFC3P40938 356 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 CCR6P51684 374 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 RPS7P62081 194 aaKnown RBP9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 SNTB2Q13425 540 aaKnown RBP9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 ERV3-1Q14264 604 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 OPCMLQ14982 345 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 LPAL2Q16609 132 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 FAM27D1Q5T7N8 215 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 DMKNQ6E0U4 476 aaPredicted RBP9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 C19orf47Q8N9M1 422 aaKnown RBP9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 FAM71CQ8NEG0 241 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 NUP43Q8NFH3 380 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 FAM174AQ8TBP5 190 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 PIGKQ92643 395 aa9.45□□□□□ -0.9
APOBEC3F-201ENST00000308521 SMIM10Q96HG1 83 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms