RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 FRKP42685 505 aaPredicted RBP8.45□□□□□ -1.06
PTPRE-202ENST00000306042 E2F2Q14209 437 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF628Q5EBL2 1059 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 TMEM244Q5VVB8 128 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 TIGD3Q6B0B8 471 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 C3P1Q6ZMU1 363 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF565Q8N9K5 539 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 TRMT10AQ8TBZ6 339 aaKnown RBP8.45□□□□□ -1.06
PTPRE-202ENST00000306042 ROBO4Q8WZ75 1007 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 KISS1RQ969F8 398 aaPredicted RBP8.45□□□□□ -1.06
PTPRE-202ENST00000306042 SCARF2Q96GP6 870 aaPredicted RBP8.45□□□□□ -1.06
PTPRE-202ENST00000306042 C10orf90Q96M02 699 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 MOKQ9UQ07 419 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 CYC1P08574 325 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 ITGAMP11215 1152 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 AZGP1P25311 298 aaKnown RBP8.45□□□□□ -1.06
PTPRE-202ENST00000306042 STARP49675 285 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 BLMHQ13867 455 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 EBPQ15125 230 aaKnown RBP8.45□□□□□ -1.06
PTPRE-202ENST00000306042 SPIN3Q5JUX0 258 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 NMNAT3Q96T66 252 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 VRK1Q99986 396 aaPredicted RBP8.45□□□□□ -1.06
PTPRE-202ENST00000306042 PAPOLGQ9BWT3 736 aaKnown RBP8.45□□□□□ -1.06
PTPRE-202ENST00000306042 AMBRA1Q9C0C7 1298 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF225Q9UK10 706 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 B3GALT5Q9Y2C3 310 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 ATP23Q9Y6H3 246 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 TCRBV3S1A0A5B6 114 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF593O00488 134 aaPredicted RBP8.45□□□□□ -1.06
PTPRE-202ENST00000306042 TBX19O60806 448 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 RAB40ALP0C0E4 278 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 PRR35P0CG20 571 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 TGFBR2P37173 567 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 RGS6P49758 472 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 TEKQ02763 1124 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF773Q6PK81 442 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 ESPNLQ6ZVH7 1005 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 FAM57BQ71RH2 274 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 MEPCEQ7L2J0 689 aaKnown RBP8.45□□□□□ -1.06
PTPRE-202ENST00000306042 NEIL3Q8TAT5 605 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 C11orf40Q8WZ69 217 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 ARSGQ96EG1 525 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 S100A16Q96FQ6 103 aaKnown RBP8.45□□□□□ -1.06
PTPRE-202ENST00000306042 CRLF2Q9HC73 371 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 UBAP1Q9NZ09 502 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 KCNIP1Q9NZI2 227 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 GPR55Q9Y2T6 319 aaPredicted RBP8.45□□□□□ -1.06
PTPRE-202ENST00000306042 PCDHGA10Q9Y5H3 936 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 IGHV3-15A0A0B4J1V0 119 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 FABP12A6NFH5 140 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 CLDN24A6NM45 220 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 PRAMEF4O60810 478 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 GASTP01350 101 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 CSN2P05814 226 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 HOXD4P09016 255 aaPredicted RBP8.44□□□□□ -1.06
PTPRE-202ENST00000306042 CD3GP09693 182 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 GABRA1P14867 456 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 NPR2P20594 1047 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 FPR3P25089 353 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 RPL27P61353 136 aaKnown RBP8.44□□□□□ -1.06
PTPRE-202ENST00000306042 RAE1P78406 368 aaKnown RBP8.44□□□□□ -1.06
PTPRE-202ENST00000306042 SMCO1Q147U7 214 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF169Q14929 603 aaPredicted RBP8.44□□□□□ -1.06
PTPRE-202ENST00000306042 CNN3Q15417 329 aaKnown RBP8.44□□□□□ -1.06
PTPRE-202ENST00000306042 PRAMEF9Q5VWM5 478 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 MDGA2Q7Z553 956 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 RBM45Q8IUH3 476 aaKnown RBP8.44□□□□□ -1.06
PTPRE-202ENST00000306042 OR5T2Q8NGG2 359 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 TMEM163Q8TC26 289 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 PIGCQ92535 297 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 BOD1Q96IK1 185 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 MGLLQ99685 303 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 ALG12Q9BV10 488 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 ACER3Q9NUN7 267 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 MED17Q9NVC6 651 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 RNF6Q9Y252 685 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 PCYT1BQ9Y5K3 369 aaPredicted RBP8.44□□□□□ -1.06
PTPRE-202ENST00000306042 MRPS18BQ9Y676 258 aaKnown RBP8.44□□□□□ -1.06
PTPRE-202ENST00000306042 FOXS1O43638 330 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 FZD7O75084 574 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 MAS1P04201 325 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 TFPTP0C1Z6 253 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 EMDP50402 254 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 INSM1Q01101 510 aaPredicted RBP8.44□□□□□ -1.06
PTPRE-202ENST00000306042 CLN3Q13286 438 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 MFAP5Q13361 173 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 ZMAT1Q5H9K5 638 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 PLCXD3Q63HM9 321 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 LRRN1Q6UXK5 716 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 NKAIN4Q8IVV8 208 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 ZFP41Q8N8Y5 198 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 DNAAF1Q8NEP3 725 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 GPR148Q8TDV2 347 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 OXGR1Q96P68 337 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 FAM240BA0A1B0GVZ2 78 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 hCG_1809904A0A1W2PP81 198 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 A0A1W2PPE2 198 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 FAM230AA0A1W2PPH8 454 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 A0A1W2PR64 198 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 A0A1W2PRV1 198 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms