RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 FAM53CQ9NYF3 392 aa9.84□□□□□ -0.83
CLCC1-201ENST00000302500 A4GNTQ9UNA3 340 aa9.84□□□□□ -0.83
CLCC1-201ENST00000302500 ARPC4-TTLL3A0A0A6YYG9 625 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 A0A1W2PR80 420 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 E7EQL1 145 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 AIM2O14862 343 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 IGKV3-15P01624 115 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 PTNP21246 168 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 CD40P25942 277 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 LSP1P33241 339 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 KDELR2P33947 212 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 PTH2RP49190 550 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 ZP4Q12836 540 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 MAPRE2Q15555 327 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 INTS11Q5TA45 600 aaKnown RBP9.83□□□□□ -0.84
CLCC1-201ENST00000302500 OR7E24Q6IFN5 339 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 ERICH5Q6P6B1 374 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 H1FNTQ75WM6 255 aaPredicted RBP9.83□□□□□ -0.84
CLCC1-201ENST00000302500 AAED1Q7RTV5 226 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 SPATA21Q7Z572 469 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 GPAT4Q86UL3 456 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 RANBP3LQ86VV4 465 aaPredicted RBP9.83□□□□□ -0.84
CLCC1-201ENST00000302500 NKAIN4Q8IVV8 208 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 LRRC17Q8N6Y2 441 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 OR1K1Q8NGR3 316 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 PIGTQ969N2 578 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 SH3GL1Q99961 368 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 TRAF4Q9BUZ4 470 aaPredicted RBP9.83□□□□□ -0.84
CLCC1-201ENST00000302500 TAPBPLQ9BX59 468 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 SLC19A3Q9BZV2 496 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 CORINQ9Y5Q5 1042 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 MAGED1Q9Y5V3 778 aaPredicted RBP9.83□□□□□ -0.84
CLCC1-201ENST00000302500 SNX13Q9Y5W8 968 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 ABCA2Q9BZC7 2435 aa9.83□□□□□ -0.84
CLCC1-201ENST00000302500 A0A096LNT2 108 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 TRAPPC13A5PLN9 417 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 CPSF4LA6NMK7 179 aaKnown RBP9.82□□□□□ -0.84
CLCC1-201ENST00000302500 MT-ATP6P00846 226 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 FOSL1P15407 271 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 GYS2P54840 703 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 UGT2B15P54855 530 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 CLDN17P56750 224 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 SELENOWP63302 87 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 KRTAP1-1Q07627 177 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 HIST3H3Q16695 136 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 HIKESHIQ53FT3 197 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 CYBRD1Q53TN4 286 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 HSP90B2PQ58FF3 399 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 TMEM225Q6GV28 225 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 CARM1Q86X55 608 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 C20orf196Q8IYI0 205 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 MICU2Q8IYU8 434 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 FAM169BQ8N8A8 192 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 OR52N5Q8NH56 324 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 VANGL1Q8TAA9 524 aaPredicted RBP9.82□□□□□ -0.84
CLCC1-201ENST00000302500 SLC25A36Q96CQ1 311 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 NMD3Q96D46 503 aaKnown RBP9.82□□□□□ -0.84
CLCC1-201ENST00000302500 TXNDC15Q96J42 360 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 MPP4Q96JB8 637 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 COX4I2Q96KJ9 171 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 LRR1Q96L50 414 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 CCL19Q99731 98 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 POLR2J2Q9GZM3 115 aaKnown RBP9.82□□□□□ -0.84
CLCC1-201ENST00000302500 POLR2J3Q9H1A7 115 aaKnown RBP9.82□□□□□ -0.84
CLCC1-201ENST00000302500 ESRP2Q9H6T0 727 aaKnown RBP9.82□□□□□ -0.84
CLCC1-201ENST00000302500 SEC61A2Q9H9S3 476 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 TMEM27Q9HBJ8 222 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 NOX3Q9HBY0 568 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 C20orf141Q9NUB4 165 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 B3GNT2Q9NY97 397 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 SLC7A7Q9UM01 511 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 IGHV1-18A0A0C4DH31 117 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 ELOVL7A1L3X0 281 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 ABCD4O14678 606 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 SEMG1P04279 462 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 IGFBP1P08833 259 aaPredicted RBP9.82□□□□□ -0.84
CLCC1-201ENST00000302500 OR1E2P47887 323 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 GSK3BP49841 420 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 ZNF133P52736 654 aaPredicted RBP9.82□□□□□ -0.84
CLCC1-201ENST00000302500 RPS4XP62701 263 aaKnown RBP9.82□□□□□ -0.84
CLCC1-201ENST00000302500 NKX6-1P78426 367 aaPredicted RBP9.82□□□□□ -0.84
CLCC1-201ENST00000302500 PUDPQ08623 228 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 PIN1Q13526 163 aaPredicted RBP9.82□□□□□ -0.84
CLCC1-201ENST00000302500 MFSD13AQ14CX5 517 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 STK11Q15831 433 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 MST1LQ2TV78 715 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 C3orf36Q3SXR2 165 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 TBRG1Q3YBR2 411 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 C9orf135Q5VTT2 229 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 SHEQ5VZ18 495 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 FBXW10Q5XX13 1052 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 NIPAL3Q6P499 406 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 PXKQ7Z7A4 578 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 PCYOX1LQ8NBM8 494 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 OR2T12Q8NG77 320 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 OR5J2Q8NH18 312 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 RASSF5Q8WWW0 418 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 ELAC2Q9BQ52 826 aaKnown RBP9.82□□□□□ -0.84
CLCC1-201ENST00000302500 ECSITQ9BQ95 431 aa9.82□□□□□ -0.84
CLCC1-201ENST00000302500 FUZQ9BT04 418 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms