RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ICAM2P13598 275 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 AHCYP23526 432 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 NAA10P41227 235 aaPredicted RBP20.1■□□□□ 0.81
SMAD1-201ENST00000302085 LCN6P62502 163 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 FABP5Q01469 135 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 BDH1Q02338 343 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 VASNQ6EMK4 673 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 LYPD4Q6UWN0 246 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 SLC35F2Q8IXU6 374 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 MFSD8Q8NHS3 518 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 ALG12Q9BV10 488 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 ANGPTL4Q9BY76 406 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 MMP27Q9H306 513 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 PROK2Q9HC23 129 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 SRA1Q9HD15 236 aaKnown RBP20.1■□□□□ 0.81
SMAD1-201ENST00000302085 AKIP1Q9NQ31 210 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 NOX1Q9Y5S8 564 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 E9PI62 339 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 TERTO14746 1132 aaKnown RBP20.1■□□□□ 0.81
SMAD1-201ENST00000302085 SLC30A4O14863 429 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 SELENOFO60613 162 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 MT-ND5P03915 603 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 OR2T7P0C7T2 308 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 IDUAP35475 653 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 OR12D2P58182 307 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 TCF15Q12870 199 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 CHAF1BQ13112 559 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.1■□□□□ 0.81
SMAD1-201ENST00000302085 CRTC2Q53ET0 693 aaPredicted RBP20.1■□□□□ 0.81
SMAD1-201ENST00000302085 ZNF468Q5VIY5 522 aaPredicted RBP20.1■□□□□ 0.81
SMAD1-201ENST00000302085 C22orf42Q6IC83 251 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 CD200R1LQ6Q8B3 271 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 GLRX5Q86SX6 157 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 ARIH2OSQ8N7S6 290 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 OR6K6Q8NGW6 343 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 OR2T27Q8NH04 317 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 DDIT4LQ96D03 193 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 POTEKPQ9BYX7 375 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 RERGLQ9H628 205 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 P4HTMQ9NXG6 502 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 EML6Q6ZMW3 1958 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 DCTN6O00399 190 aa20.09■□□□□ 0.81
SMAD1-201ENST00000302085 PLGP00747 810 aaPredicted RBP20.09■□□□□ 0.81
SMAD1-201ENST00000302085 IMPDH2P12268 514 aa20.09■□□□□ 0.81
SMAD1-201ENST00000302085 TCEA1P23193 301 aaKnown RBP20.09■□□□□ 0.81
SMAD1-201ENST00000302085 ACKR1Q16570 336 aa20.09■□□□□ 0.81
SMAD1-201ENST00000302085 TMEM156Q8N614 296 aa20.09■□□□□ 0.81
SMAD1-201ENST00000302085 NLGN4YQ8NFZ3 816 aaPredicted RBP20.09■□□□□ 0.81
SMAD1-201ENST00000302085 OR4K17Q8NGC6 315 aa20.09■□□□□ 0.81
SMAD1-201ENST00000302085 PAQR8Q8TEZ7 354 aa20.09■□□□□ 0.81
SMAD1-201ENST00000302085 BORCS5Q969J3 196 aa20.09■□□□□ 0.81
SMAD1-201ENST00000302085 C4orf36Q96KX1 117 aa20.09■□□□□ 0.81
SMAD1-201ENST00000302085 WDR70Q9NW82 654 aa20.09■□□□□ 0.81
SMAD1-201ENST00000302085 NCDNQ9UBB6 729 aa20.09■□□□□ 0.81
SMAD1-201ENST00000302085 A3GALT2U3KPV4 340 aa20.09■□□□□ 0.81
SMAD1-201ENST00000302085 KNTC1P50748 2209 aa20.09■□□□□ 0.81
SMAD1-201ENST00000302085 MS4A18H0YCH9 400 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 J3QLW9 94 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 J3QRK9 145 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 TNFSF15O95150 251 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 OR6A2O95222 327 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 TFPIP10646 304 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 ZNF19P17023 458 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 DLSTP36957 453 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 MAP2K6P52564 334 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 RPL27P61353 136 aaKnown RBP20.08■□□□□ 0.81
SMAD1-201ENST00000302085 OR7A5Q15622 319 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 MS4A18Q3C1V0 323 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 DND1Q8IYX4 353 aaKnown RBP20.08■□□□□ 0.81
SMAD1-201ENST00000302085 OR6V1Q8N148 313 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 ZNF511Q8NB15 262 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 OR5M1Q8NGP8 315 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 DCLRE1CQ96SD1 692 aaKnown RBP20.08■□□□□ 0.81
SMAD1-201ENST00000302085 GPR87Q9BY21 358 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 TXNIPQ9H3M7 391 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 MOKQ9UQ07 419 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 OTOGLQ3ZCN5 2332 aa20.08■□□□□ 0.81
SMAD1-201ENST00000302085 TRDV1A0A1B0GX56 115 aa20.08■□□□□ 0.8
SMAD1-201ENST00000302085 ARHGEF9O43307 516 aa20.08■□□□□ 0.8
SMAD1-201ENST00000302085 GPR50Q13585 617 aa20.08■□□□□ 0.8
SMAD1-201ENST00000302085 SLC22A10Q63ZE4 541 aa20.08■□□□□ 0.8
SMAD1-201ENST00000302085 H3F3CQ6NXT2 135 aa20.08■□□□□ 0.8
SMAD1-201ENST00000302085 VASH1Q7L8A9 365 aaPredicted RBP20.08■□□□□ 0.8
SMAD1-201ENST00000302085 PLCZ1Q86YW0 608 aa20.08■□□□□ 0.8
SMAD1-201ENST00000302085 ZNF519Q8TB69 540 aa20.08■□□□□ 0.8
SMAD1-201ENST00000302085 TMED9Q9BVK6 235 aa20.08■□□□□ 0.8
SMAD1-201ENST00000302085 SIAEQ9HAT2 523 aa20.08■□□□□ 0.8
SMAD1-201ENST00000302085 COPS3Q9UNS2 423 aa20.08■□□□□ 0.8
SMAD1-201ENST00000302085 PCDHGB7Q9Y5F8 929 aa20.08■□□□□ 0.8
SMAD1-201ENST00000302085 CLDN25C9JDP6 229 aa20.07■□□□□ 0.8
SMAD1-201ENST00000302085 H3BML4 177 aa20.07■□□□□ 0.8
SMAD1-201ENST00000302085 MAGEB4O15481 346 aaPredicted RBP20.07■□□□□ 0.8
SMAD1-201ENST00000302085 RENP00797 406 aa20.07■□□□□ 0.8
SMAD1-201ENST00000302085 SERPINA7P05543 415 aa20.07■□□□□ 0.8
SMAD1-201ENST00000302085 BMP4P12644 408 aa20.07■□□□□ 0.8
SMAD1-201ENST00000302085 FGF9P31371 208 aaPredicted RBP20.07■□□□□ 0.8
SMAD1-201ENST00000302085 ACVR1BP36896 505 aa20.07■□□□□ 0.8
SMAD1-201ENST00000302085 MFSD13AQ14CX5 517 aa20.07■□□□□ 0.8
SMAD1-201ENST00000302085 STPG1Q5TH74 334 aa20.07■□□□□ 0.8
SMAD1-201ENST00000302085 B3GNTL1Q67FW5 361 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms