RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 RAB6AP20340 208 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 OMPP47874 163 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 MRPL58Q14197 206 aaKnown RBP13.24□□□□□ -0.29
CDT1-201ENST00000301019 SLCO4C1Q6ZQN7 724 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 GLB1L2Q8IW92 636 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 BHLHE23Q8NDY6 225 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 MISP3Q96FF7 219 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDT1-201ENST00000301019 SLC23A2Q9UGH3 650 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 NPIPB8E9PQR5 432 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 H0YIV9 168 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 HLA-AP01891 365 aaKnown RBP13.24□□□□□ -0.29
CDT1-201ENST00000301019 PSMB5P28074 263 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 CST5P28325 142 aaPredicted RBP13.24□□□□□ -0.29
CDT1-201ENST00000301019 CTNNB1P35222 781 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 NFATC4Q14934 902 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 MAPK14Q16539 360 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 INO80EQ8NBZ0 244 aaPredicted RBP13.24□□□□□ -0.29
CDT1-201ENST00000301019 OR5T3Q8NGG3 340 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 OSTF1Q92882 214 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 ARL11Q969Q4 196 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 GFI1Q99684 422 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 LANCL2Q9NS86 450 aa13.24□□□□□ -0.29
CDT1-201ENST00000301019 PIN1P1O15428 100 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 LAP3P28838 519 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 EIF2S3P41091 472 aaKnown RBP13.23□□□□□ -0.29
CDT1-201ENST00000301019 SKP1P63208 163 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 ACTBL2Q562R1 376 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 FAM76BQ5HYJ3 339 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 LY6G6FQ5SQ64 297 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 GFI1BQ5VTD9 330 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 ZNF615Q8N8J6 731 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 AVL9Q8NBF6 648 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 PCSK9Q8NBP7 692 aaKnown RBP13.23□□□□□ -0.29
CDT1-201ENST00000301019 GTF3AQ92664 365 aaKnown RBP13.23□□□□□ -0.29
CDT1-201ENST00000301019 TOLLIPQ9H0E2 274 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 RHOFQ9HBH0 211 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 MRPL17Q9NRX2 175 aaKnown RBP13.23□□□□□ -0.29
CDT1-201ENST00000301019 FOXJ3Q9UPW0 622 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 CENPVL1A0A0U1RR11 272 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 TSPAN11A1L157 253 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 TERTO14746 1132 aaKnown RBP13.23□□□□□ -0.29
CDT1-201ENST00000301019 CLDN11O75508 207 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 CKBP12277 381 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 RPA2P15927 270 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 SNRPNP63162 240 aaKnown RBP13.23□□□□□ -0.29
CDT1-201ENST00000301019 SURF2Q15527 256 aaPredicted RBP13.23□□□□□ -0.29
CDT1-201ENST00000301019 ZNF620Q6ZNG0 422 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 ARRDC1Q8N5I2 433 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 OR4S1Q8NGB4 309 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 OR51D1Q8NGF3 324 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 OR1J4Q8NGS1 313 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 CD300LFQ8TDQ1 290 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 DCUN1D4Q92564 292 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 MYADMQ96S97 322 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 MRPS18AQ9NVS2 196 aaKnown RBP13.23□□□□□ -0.29
CDT1-201ENST00000301019 DYRK1BQ9Y463 629 aa13.23□□□□□ -0.29
CDT1-201ENST00000301019 RNF222A6NCQ9 220 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 IFITM5A6NNB3 132 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 C4orf47A7E2U8 309 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 THY1P04216 161 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 OR4E1P0C645 316 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 RPS10P46783 165 aaKnown RBP13.22□□□□□ -0.29
CDT1-201ENST00000301019 HTRA4P83105 476 aaPredicted RBP13.22□□□□□ -0.29
CDT1-201ENST00000301019 GAMTQ14353 236 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 PON3Q15166 354 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 NDUFA9Q16795 377 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 ELFN2Q5R3F8 820 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 RSPO2Q6UXX9 243 aaPredicted RBP13.22□□□□□ -0.29
CDT1-201ENST00000301019 ZNF627Q7L945 461 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 CHCHD4Q8N4Q1 142 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 NEURL3Q96EH8 262 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 PELI1Q96FA3 418 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 LCORQ96JN0 433 aaPredicted RBP13.22□□□□□ -0.29
CDT1-201ENST00000301019 AMDHD1Q96NU7 426 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 ANKRD10Q9NXR5 420 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 ABRACLQ9P1F3 81 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 PATJQ8NI35 1801 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 MYO7AQ13402 2215 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 SCN10AQ9Y5Y9 1956 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 PLPP1O14494 284 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 PLPP2O43688 288 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 AMY2AP04746 511 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 NPPBP16860 134 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 AKR1C4P17516 323 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 THPOP40225 353 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 CASRP41180 1078 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 PRKXP51817 358 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 SQSTM1Q13501 440 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 TSC22D1Q15714 1073 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 AMZ1Q400G9 498 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 OR10K2Q6IF99 312 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 C3orf33Q6P1S2 294 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 GDPD4Q6W3E5 623 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 SLC36A1Q7Z2H8 476 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.22□□□□□ -0.29
CDT1-201ENST00000301019 LRRC56Q8IYG6 542 aaPredicted RBP13.22□□□□□ -0.29
CDT1-201ENST00000301019 OR52L1Q8NGH7 329 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 GAL3ST3Q96A11 431 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 BTBD17A6NE02 478 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms