RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ANKRD10Q9NXR5 420 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 MRPL39Q9NYK5 338 aaKnown RBP11.77□□□□□ -0.53
HIF3A-204ENST00000300862 KLHDC2Q9Y2U9 406 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 ZNF337Q9Y3M9 751 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 ELOA3DA6NLF2 546 aaPredicted RBP11.76□□□□□ -0.53
HIF3A-204ENST00000300862 EFCAB7A8K855 629 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 DCTN6O00399 190 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 DHFRP00374 187 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 OR8G3PP0DMU2 310 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 SRMP19623 302 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 STOMP27105 288 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 LTBRP36941 435 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 GGTLC2Q14390 218 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 KCNAB1Q14722 419 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 ELOA3BQ3SY89 546 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 COMMD7Q86VX2 200 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 ZNF687Q8N1G0 1237 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 ZNF615Q8N8J6 731 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 ELOA3Q8NG57 546 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 TGM7Q96PF1 710 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 ALG12Q9BV10 488 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 TPSD1Q9BZJ3 242 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 SPRTNQ9H040 489 aaPredicted RBP11.76□□□□□ -0.53
HIF3A-204ENST00000300862 PNO1Q9NRX1 252 aaKnown RBP11.76□□□□□ -0.53
HIF3A-204ENST00000300862 SOHLH2Q9NX45 425 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 WDR87Q6ZQQ6 2873 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 TMEM72A0PK05 275 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 TVP23AA6NH52 213 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 SHISA7A6NL88 538 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 TRIM77I1YAP6 450 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 MPC2O95563 127 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 HPGDP15428 266 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 TAGLNQ01995 201 aaKnown RBP11.76□□□□□ -0.53
HIF3A-204ENST00000300862 CCINQ13939 588 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 LINC01590Q5TEZ4 76 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 GPR139Q6DWJ6 353 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 ZNF595Q8IYB9 648 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 ZSCAN1Q8NBB4 408 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 OR6C4Q8NGE1 309 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 HAVCR2Q8TDQ0 301 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 RGP1Q92546 391 aaPredicted RBP11.76□□□□□ -0.53
HIF3A-204ENST00000300862 KLHDC7BQ96G42 594 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 MSANTD3Q96H12 275 aa11.76□□□□□ -0.53
HIF3A-204ENST00000300862 ELF4Q99607 663 aaPredicted RBP11.76□□□□□ -0.53
HIF3A-204ENST00000300862 CDC14CA4D256 554 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 TRABD2BA6NFA1 517 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 C17orf105B2RV13 164 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 GPANK1O95872 356 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 ANXA3P12429 323 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 SOX2P48431 317 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 MMP15P51511 669 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 FUT7Q11130 342 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 EXOSC2Q13868 293 aaKnown RBP11.75□□□□□ -0.53
HIF3A-204ENST00000300862 GAS6Q14393 721 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 ODF4Q2M2E3 257 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 KLHL26Q53HC5 615 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 PRAMEF17Q5VTA0 474 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 SFRP4Q6FHJ7 346 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-204ENST00000300862 FCRLAQ7L513 359 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 LINGO2Q7L985 606 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 SLITRK4Q8IW52 837 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 ESX1Q8N693 406 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 SORCS2Q96PQ0 1159 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 NMNAT2Q9BZQ4 307 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 RTN4RQ9BZR6 473 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 NRSN2Q9GZP1 204 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 RANBP3Q9H6Z4 567 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-204ENST00000300862 UCKL1Q9NWZ5 548 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 ABRACLQ9P1F3 81 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 SPATA2Q9UM82 520 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 IGHV5-51A0A0C4DH38 117 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 PPM1BO75688 479 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 CLPSP04118 112 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 IFI6P09912 130 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 NAGAP17050 411 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 MST1P26927 711 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 GDNFP39905 211 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 GRK6P43250 576 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 CTXN1P60606 82 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 LTBQ06643 244 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 SNTB2Q13425 540 aaKnown RBP11.75□□□□□ -0.53
HIF3A-204ENST00000300862 AANATQ16613 207 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 NKAIN2Q5VXU1 208 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-204ENST00000300862 PIGKQ92643 395 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 RNF166Q96A37 237 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-204ENST00000300862 DPCDQ9BVM2 203 aaPredicted RBP11.75□□□□□ -0.53
HIF3A-204ENST00000300862 OR8D2Q9GZM6 311 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 NXF5Q9H1B4 397 aaKnown RBP11.75□□□□□ -0.53
HIF3A-204ENST00000300862 OR51J1Q9H342 316 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 ZNF304Q9HCX3 659 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 NANSQ9NR45 359 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 FLVCR2Q9UPI3 526 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 PCDHGA9Q9Y5G4 932 aaKnown RBP11.75□□□□□ -0.53
HIF3A-204ENST00000300862 CFAP54Q96N23 3096 aa11.75□□□□□ -0.53
HIF3A-204ENST00000300862 ARPC3O15145 178 aa11.74□□□□□ -0.53
HIF3A-204ENST00000300862 GMDSO60547 372 aa11.74□□□□□ -0.53
HIF3A-204ENST00000300862 SRPX2O60687 465 aaPredicted RBP11.74□□□□□ -0.53
HIF3A-204ENST00000300862 GATBO75879 557 aaKnown RBP11.74□□□□□ -0.53
HIF3A-204ENST00000300862 WISP1O95388 367 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms