RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 SLC5A2P31639 672 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CARD18P57730 90 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TRA2BP62995 288 aaKnown RBP12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 C2orf76Q3KRA6 126 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MANEAQ5SRI9 462 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MAVSQ7Z434 540 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 RBM12BQ8IXT5 1001 aaKnown RBP12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ZNF511Q8NB15 262 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OR52I1Q8NGK6 324 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 WFDC5Q8TCV5 224 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TM4SF18Q96CE8 201 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 UTP23Q9BRU9 249 aaKnown RBP12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CNOT2Q9NZN8 540 aaKnown RBP12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GNG12Q9UBI6 72 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SNX11Q9Y5W9 270 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 B4GALT3O60512 393 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CLDN1O95832 211 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 NUDT1P36639 197 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 NPBWR1P48145 328 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TSPAN31Q12999 210 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MPP7Q5T2T1 576 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ATPAF1Q5TC12 328 aaPredicted RBP12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 BRICD5Q6PL45 260 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 RBMXL3Q8N7X1 1067 aaKnown RBP12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OR4A16Q8NH70 328 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CDCP1Q9H5V8 836 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 NXT1Q9UKK6 140 aaKnown RBP12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 NENFQ9UMX5 172 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PCBD1P61457 104 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PLA2G7Q13093 441 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SEMA3BQ13214 749 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 STT3BQ8TCJ2 826 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ASB17Q8WXJ9 295 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TEX37Q96LM6 180 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GLIPR2Q9H4G4 154 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MICAL3Q7RTP6 2002 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GLSO94925 669 aaPredicted RBP12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 FURINP09958 794 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 UBE2KP61086 200 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ARL6IP1Q15041 203 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MPEG1Q2M385 716 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 C9orf152Q5JTZ5 239 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 STEAP3Q658P3 488 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 RPL22L1Q6P5R6 122 aaKnown RBP12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MBOAT2Q6ZWT7 520 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GDF7Q7Z4P5 450 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 RBM45Q8IUH3 476 aaKnown RBP12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CSNK1G1Q9HCP0 422 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SIT1Q9Y3P8 196 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TTLL8A6PVC2 850 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PKLRP30613 574 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 DCDP81605 110 aaKnown RBP12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OVCH1Q7RTY7 1134 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 UBXN10Q96LJ8 280 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TMEM59Q9BXS4 323 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 AMBRA1Q9C0C7 1298 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GAREM1Q9H706 876 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 USP3Q9Y6I4 520 aa12.56□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ZNF816-ZNF321PA0A0X1KG74 233 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 A6NHS1 94 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PHF1O43189 567 aaPredicted RBP12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SLC1A3P43003 542 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 FRMD1Q8N878 549 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ZNF321PQ8N8H1 164 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OR14A16Q8NHC5 309 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ABHD4Q8TB40 342 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CGGBP1Q9UFW8 167 aaPredicted RBP12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MCRIP1C9JLW8 97 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CCSO14618 274 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 UBBP0CG47 229 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 UBCP0CG48 685 aaKnown RBP12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CASP3P42574 277 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 CRMP1Q14194 572 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 HES1Q14469 280 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 HBMQ6B0K9 141 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GDPGP1Q6ZNW5 385 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ADAMTS14Q8WXS8 1223 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 FAM166BA8MTA8 275 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 H0Y8X5 98 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 ELAVL4P26378 380 aaKnown RBP12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 AGFG1P52594 562 aaKnown RBP12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 RPS27AP62979 156 aaKnown RBP12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 UBA52P62987 128 aaKnown RBP12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 LRRC26Q2I0M4 334 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 BOLA1Q9Y3E2 137 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 HNF1AP20823 631 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GIPRP48546 466 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TAS2R46P59540 309 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SFXN4Q6P4A7 337 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OPN5Q6U736 354 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 OR13H1Q8NG92 308 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 C20orf24Q9BUV8 137 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 POFUT1Q9H488 388 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 RAB9BQ9NP90 201 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 WSB2Q9NYS7 404 aaPredicted RBP12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PIGLQ9Y2B2 252 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 WIF1Q9Y5W5 379 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 TXNDC12O95881 172 aa12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 HNRNPFP52597 415 aaKnown RBP12.55□□□□□ -0.4
CHRFAM7A-201ENST00000299847 RPL11P62913 178 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms