RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 NPR2P20594 1047 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 THBS2P35442 1172 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 SNTB2Q13425 540 aaKnown RBP12.33□□□□□ -0.44
CTDP1-202ENST00000299543 HFEQ30201 348 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 PYHIN1Q6K0P9 492 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 ZCCHC12Q6PEW1 402 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 RBMS3Q6XE24 437 aaKnown RBP12.33□□□□□ -0.44
CTDP1-202ENST00000299543 TMPRSS11FQ6ZWK6 438 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 ZNF454Q8N9F8 522 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 PHOSPHO2Q8TCD6 241 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 YIPF5Q969M3 257 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 AUNIPQ9H7T9 357 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 LRIT1Q9P2V4 623 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 PILRAQ9UKJ1 303 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 DOCK8Q8NF50 2099 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 FXYD6-FXYD2A0A087WZ82 144 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 A0A1W2PQF6 199 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 ANXA2P2A6NMY6 339 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 TCRBP04435 133 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 CXCL2P19875 107 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 KIRREL2Q6UWL6 708 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 ZNF704Q6ZNC4 412 aaPredicted RBP12.32□□□□□ -0.44
CTDP1-202ENST00000299543 ZNRF4Q8WWF5 429 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 TM4SF19Q96DZ7 209 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 PELI1Q96FA3 418 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 LRRC46Q96FV0 321 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 ZC3HAV1LQ96H79 300 aaKnown RBP12.32□□□□□ -0.44
CTDP1-202ENST00000299543 SPSB2Q99619 263 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 CMSS1Q9BQ75 279 aaKnown RBP12.32□□□□□ -0.44
CTDP1-202ENST00000299543 FXYD6Q9H0Q3 95 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 TINAGQ9UJW2 476 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 C2orf74A8MZ97 194 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 CYR61O00622 381 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 GPR171O14626 319 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 LDOC1O95751 146 aaPredicted RBP12.32□□□□□ -0.44
CTDP1-202ENST00000299543 RPS27P42677 84 aaKnown RBP12.32□□□□□ -0.44
CTDP1-202ENST00000299543 MEOX2P50222 304 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 PLAURQ03405 335 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 ZNF511Q8NB15 262 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 AVL9Q8NBF6 648 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 RSC1A1Q92681 617 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 AHCYL2Q96HN2 611 aaKnown RBP12.32□□□□□ -0.44
CTDP1-202ENST00000299543 ARL6Q9H0F7 186 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 EMC3Q9P0I2 261 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 CSTAP01040 98 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 IGKV1D-16P01601 117 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 SMIM10L1P0DMW3 83 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 CTSEP14091 401 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 RBMS1P29558 406 aaKnown RBP12.32□□□□□ -0.44
CTDP1-202ENST00000299543 NRG3P56975 720 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 SIRPAP78324 504 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 BTG2P78543 158 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 FAM74A1Q5RGS3 127 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 FHL5Q5TD97 284 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 CA13Q8N1Q1 262 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 LGALS14Q8TCE9 139 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 ZPLD1Q8TCW7 415 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 FBXO17Q96EF6 278 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 SMIM10Q96HG1 83 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 PGLYRP3Q96LB9 341 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 EVA1AQ9H8M9 152 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 SRA1Q9HD15 236 aaKnown RBP12.32□□□□□ -0.44
CTDP1-202ENST00000299543 MKKSQ9NPJ1 570 aaPredicted RBP12.32□□□□□ -0.44
CTDP1-202ENST00000299543 NIT2Q9NQR4 276 aa12.32□□□□□ -0.44
CTDP1-202ENST00000299543 A0A087WV48 116 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 A0A0B4J2E0 115 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 A0A1B0GX12 115 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 B4DGG1 531 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 ATP1B1P05026 303 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 ADRB1P08588 477 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 HPGDP15428 266 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 ST6GAL1P15907 406 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 HNRNPA2B1P22626 353 aaKnown RBP12.31□□□□□ -0.44
CTDP1-202ENST00000299543 ARFIP1P53367 373 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 TAS2R43P59537 309 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 PSG6Q00889 435 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 BDH1Q02338 343 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 PLA1AQ53H76 456 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 RGS7BPQ6MZT1 257 aaPredicted RBP12.31□□□□□ -0.44
CTDP1-202ENST00000299543 RPL13AP3Q6NVV1 102 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 SLC35F2Q8IXU6 374 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 OR13H1Q8NG92 308 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 OR4C3Q8NH37 302 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 FLVCR1-AS1Q8TAF5 88 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 SLC37A2Q8TED4 501 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 MRGPRX1Q96LB2 322 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 CNN2Q99439 309 aaKnown RBP12.31□□□□□ -0.44
CTDP1-202ENST00000299543 NOX4Q9NPH5 578 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 OBP2AQ9NY56 170 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 RPH3AQ9Y2J0 694 aaPredicted RBP12.31□□□□□ -0.44
CTDP1-202ENST00000299543 KLF2Q9Y5W3 355 aaPredicted RBP12.31□□□□□ -0.44
CTDP1-202ENST00000299543 HEATR5AQ86XA9 2040 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 ASCC3Q8N3C0 2202 aaKnown RBP12.31□□□□□ -0.44
CTDP1-202ENST00000299543 PRR19A6NJB7 356 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 GALR3O60755 368 aaPredicted RBP12.31□□□□□ -0.44
CTDP1-202ENST00000299543 LYPD3O95274 346 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 APOC1P02654 83 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 PAN3Q58A45 887 aaKnown RBP12.31□□□□□ -0.44
CTDP1-202ENST00000299543 ARHGAP11AQ6P4F7 1023 aa12.31□□□□□ -0.44
CTDP1-202ENST00000299543 HAGHLQ6PII5 290 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms