RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 BAIAP2Q9UQB8 552 aa9.25□□□□□ -0.93
FOXN4-201ENST00000299162 KLF2Q9Y5W3 355 aaPredicted RBP9.25□□□□□ -0.93
FOXN4-201ENST00000299162 GPANK1O95872 356 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 IFNA7P01567 189 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 RAF1P04049 648 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 TRAPPC2P0DI81 140 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 TRAPPC2BP0DI82 140 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 EFNB1P98172 346 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 SCRN3Q0VDG4 424 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 TNK1Q13470 666 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 TDGQ13569 410 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 CD226Q15762 336 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 HYAL4Q2M3T9 481 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 SFRP4Q6FHJ7 346 aaPredicted RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 ZNF613Q6PF04 617 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 ZNF511Q8NB15 262 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 OR11H7Q8NGC8 314 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 ZNRF4Q8WWF5 429 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 MS4A3Q96HJ5 214 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 PDCD1LG2Q9BQ51 273 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 NXF5Q9H1B4 397 aaKnown RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 ING1Q9UK53 422 aaPredicted RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 A0A087WV48 116 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 TEX13CA0A0J9YWL9 993 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 STMND1H3BQB6 276 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 BHLHE40O14503 412 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 MBTPS2O43462 519 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 HCRTR2O43614 444 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 SULT1B1O43704 296 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 CHP2O43745 196 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 SELENOFO60613 162 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 RAD1O60671 282 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 HLA-DPB1P04440 258 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 THBS1P07996 1170 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 CT45A8P0DMV1 189 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 CT45A9P0DMV2 189 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 ANXA3P12429 323 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 S1PR1P21453 382 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 AHCYP23526 432 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 GABRA5P31644 462 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 NUP62P37198 522 aaPredicted RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 AQP2P41181 271 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 FNTBP49356 437 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 ANGPT1Q15389 498 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 NSDHLQ15738 373 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 SMAD2Q15796 467 aaKnown RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 CT45A2Q5DJT8 189 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 PDSS1Q5T2R2 415 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 ZNF782Q6ZMW2 699 aaPredicted RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 ZNF433Q8N7K0 673 aaPredicted RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 OR5W2Q8NH69 310 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 SNX33Q8WV41 574 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 GCDHQ92947 438 aaPredicted RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 RBPMSQ93062 196 aaKnown RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 ZNF578Q96N58 590 aaPredicted RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 NKX3-1Q99801 234 aaPredicted RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 ASB6Q9NWX5 421 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 TMEM129A0AVI4 362 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 TVP23AA6NH52 213 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 ELOA3DA6NLF2 546 aaPredicted RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 CDC40O60508 579 aaKnown RBP eCLIP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 HCN1O60741 890 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 MT-ND4P03905 459 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 OPN1LWP04000 364 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 RNF224P0DH78 156 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 APEHP13798 732 aaKnown RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 ACAA2P42765 397 aaKnown RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 NR0B1P51843 470 aaKnown RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 TUSC1Q2TAM9 212 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 ELOA3BQ3SY89 546 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 C19orf48Q6RUI8 117 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 GKN2Q86XP6 184 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 ELOA3Q8NG57 546 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 MOSPD2Q8NHP6 518 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 METTL17Q9H7H0 456 aaPredicted RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 FGF20Q9NP95 211 aaPredicted RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 ZNF223Q9UK11 482 aaPredicted RBP9.24□□□□□ -0.93
FOXN4-201ENST00000299162 MKL2Q9ULH7 1088 aa9.24□□□□□ -0.93
FOXN4-201ENST00000299162 A0A087WV62 115 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 A0A0B4J2E0 115 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 A0A1B0GX12 115 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 A0A1W2PPL8 197 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 LINC00862A6NCI5 91 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 DOK2O60496 412 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 CTNSO60931 367 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 NKX2-2O95096 273 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 ALDOBP05062 364 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 ELK1P19419 428 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 QSOX2Q6ZRP7 698 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 SYT13Q7L8C5 426 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 Q96M85 177 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 VSTM2LQ96N03 204 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 STACQ99469 402 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 UBE2ZQ9H832 354 aaPredicted RBP9.23□□□□□ -0.93
FOXN4-201ENST00000299162 MKKSQ9NPJ1 570 aaPredicted RBP9.23□□□□□ -0.93
FOXN4-201ENST00000299162 BABAM2Q9NXR7 383 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 PRELID3BQ9Y3B1 194 aa9.23□□□□□ -0.93
FOXN4-201ENST00000299162 SF3B6Q9Y3B4 125 aaKnown RBP9.23□□□□□ -0.93
FOXN4-201ENST00000299162 PRRC2CQ9Y520 2896 aaKnown RBP9.23□□□□□ -0.93
FOXN4-201ENST00000299162 IQCMA0A1B0GVH7 501 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms