RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 PLK5Q496M5 336 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 TCTE1Q5JU00 501 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 AGAP6Q5VW22 663 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 SLC22A10Q63ZE4 541 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 C8orf82Q6P1X6 216 aaPredicted RBP4.4□□□□□ -1.7
UBR1-201ENST00000290650 GDPD3Q7L5L3 318 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 NOXA1Q86UR1 476 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 TMEM17Q86X19 198 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 C16orf52Q8NHV5 167 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 SNAPC3Q92966 411 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 TMEM106AQ96A25 262 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 ELSPBP1Q96BH3 223 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 ELMOD3Q96FG2 381 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 AGAP4Q96P64 663 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 EPHX3Q9H6B9 360 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 LIN7BQ9HAP6 207 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 TMEM45AQ9NWC5 275 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 REV1Q9UBZ9 1251 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 FLVCR2Q9UPI3 526 aa4.4□□□□□ -1.7
UBR1-201ENST00000290650 APC2O95996 2303 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 CNOT4O95628 575 aaKnown RBP4.4□□□□□ -1.71
UBR1-201ENST00000290650 LCATP04180 440 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 CT62P0C5K7 136 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 GABRG2P18507 467 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 ARHGDIBP52566 201 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 PRPS1P60891 318 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 LTBQ06643 244 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 PRSS53Q2L4Q9 553 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 PRTGQ2VWP7 1150 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 SLX4IPQ5VYV7 408 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 WBP2NLQ6ICG8 309 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 SSX6Q7RTT6 188 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 NANOGP1Q8N7R0 232 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 BCORP1Q8N888 145 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 OR51T1Q8NGJ9 327 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 DYNC2LI1Q8TCX1 351 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 APH1BQ8WW43 257 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 DDIT4LQ96D03 193 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 TCTN2Q96GX1 697 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 ZNF717Q9BY31 904 aaPredicted RBP4.4□□□□□ -1.71
UBR1-201ENST00000290650 ACTR6Q9GZN1 396 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 FAM60AQ9NP50 221 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 C19orf25Q9UFG5 118 aaPredicted RBP4.4□□□□□ -1.71
UBR1-201ENST00000290650 SCML1Q9UN30 329 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 SIT1Q9Y3P8 196 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 CCL27Q9Y4X3 112 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 V9GY05 133 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 A0A0A6YYD5 115 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 HSPA12AO43301 675 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 ANXA7P20073 488 aaKnown RBP4.4□□□□□ -1.71
UBR1-201ENST00000290650 BIDP55957 195 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 TRA2BP62995 288 aaKnown RBP4.4□□□□□ -1.71
UBR1-201ENST00000290650 MRPS21P82921 87 aaKnown RBP4.4□□□□□ -1.71
UBR1-201ENST00000290650 TMEM164Q5U3C3 297 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 FAM199XQ6PEV8 388 aaPredicted RBP4.4□□□□□ -1.71
UBR1-201ENST00000290650 VASH2Q86V25 355 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 OR4Q3Q8NH05 313 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 THAP6Q8TBB0 222 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 KLHL15Q96M94 604 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 CCNL2Q96S94 520 aaPredicted RBP4.4□□□□□ -1.71
UBR1-201ENST00000290650 PIGUQ9H490 435 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 MUTYHQ9UIF7 546 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 ENTPD2Q9Y5L3 495 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 IGLV3-16A0A075B6K0 115 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 TMEM269A0A1B0GVZ9 245 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 OR5K3A6NET4 321 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 SSX5O60225 188 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 PER3P56645 1201 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 ZXDCQ2QGD7 858 aaPredicted RBP4.4□□□□□ -1.71
UBR1-201ENST00000290650 SLC25A35Q3KQZ1 300 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 CHRFAM7AQ494W8 412 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 OR10K2Q6IF99 312 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 ZNF704Q6ZNC4 412 aaPredicted RBP4.4□□□□□ -1.71
UBR1-201ENST00000290650 LINC00696Q6ZRV3 163 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 SIAH3Q8IW03 269 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 BEST3Q8N1M1 668 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 GDPD1Q8N9F7 314 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 TEAD3Q99594 435 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 CDCA3Q99618 268 aaPredicted RBP4.4□□□□□ -1.71
UBR1-201ENST00000290650 SEC22CQ9BRL7 303 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 SMIM3Q9BZL3 60 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 OR2B2Q9GZK3 357 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 DUSP21Q9H596 190 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 CCDC86Q9H6F5 360 aaKnown RBP4.4□□□□□ -1.71
UBR1-201ENST00000290650 METTL17Q9H7H0 456 aaPredicted RBP4.4□□□□□ -1.71
UBR1-201ENST00000290650 ASIC5Q9NY37 505 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 NOX1Q9Y5S8 564 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 COL4A6Q14031 1691 aa4.4□□□□□ -1.71
UBR1-201ENST00000290650 CENPVL1A0A0U1RR11 272 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 K7EQS6 105 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 FFAR1O14842 300 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 CREBL2O60519 120 aaPredicted RBP4.39□□□□□ -1.71
UBR1-201ENST00000290650 IFNA7P01567 189 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 ZNF806P0C7X5 589 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 TGM1P22735 817 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 HTR1FP30939 366 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 POU4F2Q12837 409 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 GPR50Q13585 617 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 SERTAD2Q14140 314 aa4.39□□□□□ -1.71
UBR1-201ENST00000290650 FBXO42Q6P3S6 717 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms