RNA–Protein interactions for RNA: ENST00000286301.7

CSF1R-201, Transcript of colony stimulating factor 1 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1R, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-201ENST00000286301 OC90Q02509 493 aaPredicted RBP8.56□□□□□ -1.04
CSF1R-201ENST00000286301 ACY1Q03154 408 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 C19orf57Q0VDD7 668 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 NR0B2Q15466 257 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 SSX1Q16384 188 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 HLA-BQ31612 363 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 NKAIN1Q4KMZ8 207 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 PRAMEF20Q5VT98 475 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 RPL13AP3Q6NVV1 102 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 PAPD4Q6PIY7 484 aaKnown RBP8.56□□□□□ -1.04
CSF1R-201ENST00000286301 TMPRSS9Q7Z410 1059 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 SLC25A45Q8N413 288 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 TOMM5Q8N4H5 51 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 ZNF680Q8NEM1 530 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 SMIM10Q96HG1 83 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 DPAGT1Q9H3H5 408 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 SEC61A2Q9H9S3 476 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 C12orf10Q9HB07 376 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 FLRT3Q9NZU0 649 aa8.56□□□□□ -1.04
CSF1R-201ENST00000286301 A0A1B0GW55 424 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 SPARCP09486 303 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 DUX4L2P0CJ85 424 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 DUX4L3P0CJ86 424 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 DUX4L4P0CJ87 422 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 DUX4L5P0CJ88 424 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 DUX4L6P0CJ89 424 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 DUX4L7P0CJ90 424 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 PGCP20142 388 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 LCN1P31025 176 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 SFTPDP35247 375 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 GUCA1AP43080 201 aaPredicted RBP8.55□□□□□ -1.04
CSF1R-201ENST00000286301 ZNF136P52737 540 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 CDK5Q00535 292 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 ASAH1Q13510 395 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 PRTGQ2VWP7 1150 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 GFOD2Q3B7J2 385 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 FAM27D1Q5T7N8 215 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 LYPD4Q6UWN0 246 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 NPSR1Q6W5P4 371 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 SYT9Q86SS6 491 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 IZUMO1Q8IYV9 350 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 RNF113BQ8IZP6 322 aaKnown RBP8.55□□□□□ -1.04
CSF1R-201ENST00000286301 SIRT6Q8N6T7 355 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 OR5W2Q8NH69 310 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 TSEN15Q8WW01 171 aaKnown RBP8.55□□□□□ -1.04
CSF1R-201ENST00000286301 CNN2Q99439 309 aaKnown RBP8.55□□□□□ -1.04
CSF1R-201ENST00000286301 TEAD3Q99594 435 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 NUDT9Q9BW91 350 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 HCAR1Q9BXC0 346 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 SCPEP1Q9HB40 452 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 IL20Q9NYY1 176 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 DUX4Q9UBX2 424 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 LAMP5Q9UJQ1 280 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 TP53BP1Q12888 1972 aaPredicted RBP8.55□□□□□ -1.04
CSF1R-201ENST00000286301 C9J4A7 227 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 L7N2F9 121 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 DOK2O60496 412 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 FMO6PO60774 539 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 F10P00742 488 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 CCL7P80098 99 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 PUDPQ08623 228 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 SQSTM1Q13501 440 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 WBP2NLQ6ICG8 309 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 C17orf107Q6ZR85 190 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 ST8SIA4Q92187 359 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 RFT1Q96AA3 541 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 SLC46A1Q96NT5 459 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 NECAB3Q96P71 396 aaPredicted RBP8.55□□□□□ -1.04
CSF1R-201ENST00000286301 OR11A1Q9GZK7 315 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 CHRDQ9H2X0 955 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 MRPL15Q9P015 296 aaKnown RBP8.55□□□□□ -1.04
CSF1R-201ENST00000286301 NUP210Q8TEM1 1887 aaPredicted RBP8.55□□□□□ -1.04
CSF1R-201ENST00000286301 EFCAB7A8K855 629 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 NUDT21O43809 227 aaKnown RBP8.55□□□□□ -1.04
CSF1R-201ENST00000286301 NAGAP17050 411 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 GDI2P50395 445 aaKnown RBP8.55□□□□□ -1.04
CSF1R-201ENST00000286301 C3orf38Q5JPI3 329 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 HEPHL1Q6MZM0 1159 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 NUP54Q7Z3B4 507 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 FGD2Q7Z6J4 655 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.55□□□□□ -1.04
CSF1R-201ENST00000286301 RHBDD1Q8TEB9 315 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 TMEM138Q9NPI0 162 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 BABAM2Q9NXR7 383 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 ZNF346Q9UL40 294 aaKnown RBP8.55□□□□□ -1.04
CSF1R-201ENST00000286301 SLC6A5Q9Y345 797 aa8.55□□□□□ -1.04
CSF1R-201ENST00000286301 ZNF670-ZNF695F2Z2N8 137 aa8.54□□□□□ -1.04
CSF1R-201ENST00000286301 TGFBR3LH3BV60 316 aa8.54□□□□□ -1.04
CSF1R-201ENST00000286301 GABRPO00591 440 aa8.54□□□□□ -1.04
CSF1R-201ENST00000286301 CT45A8P0DMV1 189 aa8.54□□□□□ -1.04
CSF1R-201ENST00000286301 CT45A9P0DMV2 189 aa8.54□□□□□ -1.04
CSF1R-201ENST00000286301 HTR1FP30939 366 aa8.54□□□□□ -1.04
CSF1R-201ENST00000286301 MAP2K6P52564 334 aa8.54□□□□□ -1.04
CSF1R-201ENST00000286301 ELAVL1Q15717 326 aaKnown RBP8.54□□□□□ -1.04
CSF1R-201ENST00000286301 CD226Q15762 336 aa8.54□□□□□ -1.04
CSF1R-201ENST00000286301 CT45A2Q5DJT8 189 aa8.54□□□□□ -1.04
CSF1R-201ENST00000286301 CARD17Q5XLA6 110 aa8.54□□□□□ -1.04
CSF1R-201ENST00000286301 OR4K17Q8NGC6 315 aa8.54□□□□□ -1.04
CSF1R-201ENST00000286301 OR13C5Q8NGS8 318 aa8.54□□□□□ -1.04
CSF1R-201ENST00000286301 VSTM2LQ96N03 204 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms