RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 SLC6A5Q9Y345 797 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 FAM74A7A6NL05 159 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 ZNF879B4DU55 563 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 KRT33AO76009 404 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 NKX2-2O95096 273 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 STATHP02808 62 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 H2AFB1P0C5Y9 115 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 NOS3P29474 1203 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 ACVR1BP36896 505 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 RPL35P42766 123 aaKnown RBP9.51□□□□□ -0.89
SKA1-201ENST00000285116 GDI2P50395 445 aaKnown RBP9.51□□□□□ -0.89
SKA1-201ENST00000285116 AKR1D1P51857 326 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 SCAND1P57086 179 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 SIRPAP78324 504 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 DEFA5Q01523 94 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 MGAT2Q10469 447 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 IL10RAQ13651 578 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 RUNX2Q13950 521 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 FAM74A3Q4VXF1 159 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 C2orf27AQ580R0 203 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 ZNF660Q6AZW8 331 aaPredicted RBP9.51□□□□□ -0.89
SKA1-201ENST00000285116 PELI1Q96FA3 418 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 CNN2Q99439 309 aaKnown RBP9.51□□□□□ -0.89
SKA1-201ENST00000285116 TRIM2Q9C040 744 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 NKX6-2Q9C056 277 aaPredicted RBP9.51□□□□□ -0.89
SKA1-201ENST00000285116 EXOSC3Q9NQT5 275 aaKnown RBP9.51□□□□□ -0.89
SKA1-201ENST00000285116 DOCK8Q8NF50 2099 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 OR52A4PA6NMU1 304 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 KHDRBS3O75525 346 aaKnown RBP9.51□□□□□ -0.89
SKA1-201ENST00000285116 IGFALSP35858 605 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 CD96P40200 585 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 FBXO42Q6P3S6 717 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 CMTM4Q8IZR5 234 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 CAMKVQ8NCB2 501 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 PXT1Q8NFP0 134 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 OR52I2Q8NH67 350 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 LGALS14Q8TCE9 139 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 NSMAFQ92636 917 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 PEX11GQ96HA9 241 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 ACTR10Q9NZ32 417 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 OPN4Q9UHM6 478 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 PLCL2Q9UPR0 1127 aa9.51□□□□□ -0.89
SKA1-201ENST00000285116 URB1O60287 2271 aaKnown RBP9.51□□□□□ -0.89
SKA1-201ENST00000285116 UBE2QL1A1L167 161 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 PRSS44E7EML9 344 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 PLRG1O43660 514 aaKnown RBP9.5□□□□□ -0.89
SKA1-201ENST00000285116 ANXA7P20073 488 aaKnown RBP9.5□□□□□ -0.89
SKA1-201ENST00000285116 CFPP27918 469 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 PYCR1P32322 319 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 GPR85P60893 370 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 GMFBP60983 142 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 PRICKLE4Q2TBC4 344 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 NHLRC1Q6VVB1 395 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 ABHD13Q7L211 337 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 SSX6Q7RTT6 188 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 TMEM17Q86X19 198 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 OR6K3Q8NGY3 331 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 FCAMRQ8WWV6 532 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 ORAI1Q96D31 301 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 WDR89Q96FK6 387 aaPredicted RBP9.5□□□□□ -0.89
SKA1-201ENST00000285116 RBM18Q96H35 190 aaKnown RBP9.5□□□□□ -0.89
SKA1-201ENST00000285116 ORAI3Q9BRQ5 295 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 APOOQ9BUR5 198 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 NMNAT2Q9BZQ4 307 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 MLXQ9UH92 298 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 ATG2AQ2TAZ0 1938 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 FXYD6-FXYD2A0A087WZ82 144 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 ANKRD20A5PA0PJZ0 165 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 F8W036 122 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 PRAMEF2O60811 474 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 SIX6O95475 246 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 CALCBP10092 127 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 FUT1P19526 365 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 DIO1P49895 249 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 MAT1AQ00266 395 aaKnown RBP9.5□□□□□ -0.89
SKA1-201ENST00000285116 LINC00303Q3SY05 128 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 FAM199XQ6PEV8 388 aaPredicted RBP9.5□□□□□ -0.89
SKA1-201ENST00000285116 LINC00469Q8N7U9 141 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 COX18Q8N8Q8 333 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 CCNL2Q96S94 520 aaPredicted RBP9.5□□□□□ -0.89
SKA1-201ENST00000285116 GPX7Q96SL4 187 aaPredicted RBP9.5□□□□□ -0.89
SKA1-201ENST00000285116 LMF2Q9BU23 707 aaKnown RBP9.5□□□□□ -0.89
SKA1-201ENST00000285116 FXYD6Q9H0Q3 95 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 PLEKHM1Q9Y4G2 1056 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 ENTPD2Q9Y5L3 495 aa9.5□□□□□ -0.89
SKA1-201ENST00000285116 MAP1BP46821 2468 aaKnown RBP9.49□□□□□ -0.89
SKA1-201ENST00000285116 ARPC3O15145 178 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 ADAM11O75078 769 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 NDUFB6O95139 128 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 PPP1R3DO95685 299 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 GPR75O95800 540 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 RAB40ALP0C0E4 278 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 GKN3PP0CG01 181 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 FCARP24071 287 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 DPP4P27487 766 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 ACAA2P42765 397 aaKnown RBP9.49□□□□□ -0.89
SKA1-201ENST00000285116 CLDN2P57739 230 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 MC2RQ01718 297 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 LGALS3BPQ08380 585 aa9.49□□□□□ -0.89
SKA1-201ENST00000285116 TRMT12Q53H54 448 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms