RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 CLIC3O95833 236 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 PRSS1P07477 247 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 FCGR3AP08637 254 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 HBQ1P09105 142 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 FCARP24071 287 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 CRATP43155 626 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 TMED10P49755 219 aaKnown RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 SLC26A2P50443 739 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 PLK1P53350 603 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 ZP4Q12836 540 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 MOGAT2Q3SYC2 334 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 DCST2Q5T1A1 773 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 PXDC1Q5TGL8 231 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 HHATQ5VTY9 493 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 OR52E8Q6IFG1 317 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 CNIH2Q6PI25 160 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 SH2D5Q6ZV89 423 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 UNC93AQ86WB7 457 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 IFNEQ86WN2 208 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 ADAD2Q8NCV1 583 aaKnown RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 NFAM1Q8NET5 270 aaPredicted RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 MAGEE2Q8TD90 523 aaPredicted RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 ARMC7Q9H6L4 198 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 LRRC4Q9HBW1 653 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 RAB18Q9NP72 206 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 OR2S2Q9NQN1 319 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 ADARB2Q9NS39 739 aaKnown RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 SIPA1L1O43166 1804 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 CHD4Q14839 1912 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 IGLV5-39A0A0G2JS06 123 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 CDC7O00311 574 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 MID1O15344 667 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 RAB3DO95716 219 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 PIGRP01833 764 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 HLA-HP01893 362 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 PCCAP05165 728 aaPredicted RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 TCN1P20061 433 aaPredicted RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 LCN1P31025 176 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 HAAOP46952 286 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 GAS1P54826 345 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 ADARB1P78563 741 aaKnown RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 OC90Q02509 493 aaPredicted RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 TLE4Q04727 773 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 DUSP5Q16690 384 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 UPP1Q16831 310 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 ZNF691Q5VV52 312 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.42□□□□□ -2.02
CHD1-201ENST00000284049 ARCQ7LC44 396 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 PARGQ86W56 976 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 SELENOHQ8IZQ5 122 aaKnown RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 FBXL14Q8N1E6 418 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 CCDC26Q8TAB7 109 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 SARAFQ96BY9 339 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 SORCS2Q96PQ0 1159 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 CTRCQ99895 268 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 MLST8Q9BVC4 326 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 C6orf62Q9GZU0 229 aaPredicted RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 INTS9Q9NV88 658 aaKnown RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 RALYQ9UKM9 306 aaKnown RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 YARS2Q9Y2Z4 477 aaKnown RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 RPL36Q9Y3U8 105 aaKnown RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 KLF2Q9Y5W3 355 aaPredicted RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 TRAV8-7A0A075B6U6 113 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 A0A1B0GW55 424 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 SRPX2O60687 465 aaPredicted RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 CDC123O75794 336 aaPredicted RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 DUX4L2P0CJ85 424 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 DUX4L3P0CJ86 424 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 DUX4L4P0CJ87 422 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 DUX4L5P0CJ88 424 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 DUX4L6P0CJ89 424 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 DUX4L7P0CJ90 424 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 MAGEA2P43356 314 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 KPNA2P52292 529 aaKnown RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 RPS27AP62979 156 aaKnown RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 TFDP2Q14188 446 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 HAGHQ16775 308 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 NDUFAF6Q330K2 333 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 LIPNQ5VXI9 398 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 NEPROQ6NW34 567 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 DUX4L9Q6RFH8 374 aaPredicted RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 SLC51BQ86UW2 128 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 RNF130Q86XS8 419 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 PUSL1Q8N0Z8 303 aaKnown RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 OR52B6Q8NGF0 335 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 HTR3CQ8WXA8 447 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 CMTM5Q96DZ9 223 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 POM121L2Q96KW2 1035 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 CASD1Q96PB1 797 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 MCCC1Q96RQ3 725 aaPredicted RBP2.42□□□□□ -2.02
CHD1-201ENST00000284049 KRTAP17-1Q9BYP8 105 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 UCK2Q9BZX2 261 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 DEFB129Q9H1M3 183 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 DSN1Q9H410 356 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 FLRT3Q9NZU0 649 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 DUX4Q9UBX2 424 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 SERGEFQ9UGK8 458 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 RAI2Q9Y5P3 530 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 ROBO3Q96MS0 1386 aa2.42□□□□□ -2.02
CHD1-201ENST00000284049 PLIN4Q96Q06 1357 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms