RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 LSSP48449 732 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 P2RX3P56373 397 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 TRIP6Q15654 476 aaKnown RBP11.79□□□□□ -0.52
C9orf3-201ENST00000277198 SLC6A19Q695T7 634 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 DBX2Q6ZNG2 339 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 OOSP2Q86WS3 158 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 FAM109AQ8N4B1 249 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 ZNF614Q8N883 585 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 NPEPL1Q8NDH3 523 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 SDR9C7Q8NEX9 313 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 ZNF671Q8TAW3 534 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 KLHDC7BQ96G42 594 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 MED30Q96HR3 178 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 ZFP3Q96NJ6 502 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 CCDC3Q9BQI4 270 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 Q9N2J8 555 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 IER3IP1Q9Y5U9 82 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 ARID1BQ8NFD5 2236 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-201ENST00000277198 MEIKINA0A087WXM9 373 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 SMLR1H3BR10 107 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 AIPO00170 330 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 ADAM11O75078 769 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 TPOP07202 933 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 SULT1A3P0DMM9 295 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 SULT1A4P0DMN0 295 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 APEHP13798 732 aaKnown RBP11.79□□□□□ -0.52
C9orf3-201ENST00000277198 SRMP19623 302 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 EPHA8P29322 1005 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-201ENST00000277198 EPHA4P54764 986 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 PER3P56645 1201 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 SNRPD2P62316 118 aaKnown RBP11.79□□□□□ -0.52
C9orf3-201ENST00000277198 RPS4XP62701 263 aaKnown RBP11.79□□□□□ -0.52
C9orf3-201ENST00000277198 IGLV3-21P80748 117 aaPredicted RBP11.79□□□□□ -0.52
C9orf3-201ENST00000277198 DGCR2P98153 550 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 ESCO2Q56NI9 601 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 KIRREL2Q6UWL6 708 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 SLC35F3Q8IY50 421 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 ZNF527Q8NB42 609 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 OR13C5Q8NGS8 318 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 RHBDD1Q8TEB9 315 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 SAP25Q8TEE9 199 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 DOK4Q8TEW6 326 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 LIPHQ8WWY8 451 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 RIT1Q92963 219 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 RBM18Q96H35 190 aaKnown RBP11.79□□□□□ -0.52
C9orf3-201ENST00000277198 GSDMCQ9BYG8 508 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 SLCO1C1Q9NYB5 712 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 SLC23A1Q9UHI7 598 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 ZNF222Q9UK12 451 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 MGAT4AQ9UM21 535 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 WASF3Q9UPY6 502 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 MRPS33Q9Y291 106 aaKnown RBP11.79□□□□□ -0.52
C9orf3-201ENST00000277198 ZNF281Q9Y2X9 895 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 NPTNQ9Y639 398 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 IGF2RP11717 2491 aa11.79□□□□□ -0.52
C9orf3-201ENST00000277198 EPG5Q9HCE0 2579 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 ARPC4-TTLL3A0A0A6YYG9 625 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 A0A1B0GVC2 190 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 A6NIN4 97 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 IFITM5A6NNB3 132 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 MCIDASD6RGH6 385 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 AGRPO00253 132 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 PRAMEF2O60811 474 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 CTNSO60931 367 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 TNFP01375 233 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 EDNRAP25101 427 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 CCDC157Q569K6 752 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 ELFN2Q5R3F8 820 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 TEX261Q6UWH6 196 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 KANSL1Q7Z3B3 1105 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 ZNF595Q8IYB9 648 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 ARHGEF39Q8N4T4 335 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 SCP2D1Q9UJQ7 156 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 GNG8Q9UK08 70 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 MOKQ9UQ07 419 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 MRPS7Q9Y2R9 242 aaKnown RBP11.78□□□□□ -0.52
C9orf3-201ENST00000277198 U3KQ87 197 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 LINC00862A6NCI5 91 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 GABARAPH6UMI1 98 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 GPR171O14626 319 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 ZZEF1O43149 2961 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 PEX14O75381 377 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 OR7A10O76100 309 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 GLCEO94923 617 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 TGM6O95932 706 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 IGKV1D-16P01601 117 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 TACSTD2P09758 323 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 RAB40ALP0C0E4 278 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 CALCBP10092 127 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 PVRP15151 417 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 SPI1P17947 270 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 RPL4P36578 427 aaKnown RBP11.78□□□□□ -0.52
C9orf3-201ENST00000277198 MNDAP41218 407 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 CCR9P51686 369 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 SLC25A1P53007 311 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 CLDN6P56747 220 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 VSX2P58304 361 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-201ENST00000277198 FZD2Q14332 565 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.78□□□□□ -0.52
C9orf3-201ENST00000277198 DGAT2L6Q6ZPD8 337 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms