RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 B3GALT5Q9Y2C3 310 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 CAPN7Q9Y6W3 813 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 CR1P17927 2039 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 E7EQL1 145 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 M0R1B8 84 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 CHP2O43745 196 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 NDUFS7O75251 213 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 NPPAP01160 153 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 TNFRSF1BP20333 461 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 CDH11P55287 796 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 ATP5J2P56134 94 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 TMEM108Q6UXF1 575 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 NHLRC1Q6VVB1 395 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 B3GLCTQ6Y288 498 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 ADPRHL1Q8NDY3 354 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 OR1K1Q8NGR3 316 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 ADAMTS16Q8TE57 1224 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 RCN3Q96D15 328 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 BOD1Q96IK1 185 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 SH3GL1Q99961 368 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 TRAF4Q9BUZ4 470 aaPredicted RBP12.62□□□□□ -0.39
HMGN3-201ENST00000275036 LINC00470Q9BZP3 86 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 PCDHAC1Q9H158 963 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 NELFAQ9H3P2 528 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 CISD1Q9NZ45 108 aaKnown RBP12.62□□□□□ -0.39
HMGN3-201ENST00000275036 GMPR2Q9P2T1 348 aaKnown RBP12.62□□□□□ -0.39
HMGN3-201ENST00000275036 RCE1Q9Y256 329 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 AMDHD2Q9Y303 409 aa12.62□□□□□ -0.39
HMGN3-201ENST00000275036 LOC102725191A0A1B0GVB3 256 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 ZNF587BE7ETH6 402 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 TMCC2O75069 709 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 KRT33AO76009 404 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 IGHV4-39P01824 125 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 PTAFRP25105 342 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 TGFBR3Q03167 851 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 KRTAP1-1Q07627 177 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 TBRG1Q3YBR2 411 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 PHYHD1Q5SRE7 291 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 KLHL17Q6TDP4 642 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 ABHD12BQ7Z5M8 362 aaPredicted RBP12.61□□□□□ -0.39
HMGN3-201ENST00000275036 TMEM123Q8N131 208 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 SLC26A7Q8TE54 656 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 BCL2L2Q92843 193 aaPredicted RBP12.61□□□□□ -0.39
HMGN3-201ENST00000275036 ZNF837Q96EG3 531 aaPredicted RBP12.61□□□□□ -0.39
HMGN3-201ENST00000275036 OR2M2Q96R28 347 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 EPYCQ99645 322 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 BDH2Q9BUT1 245 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 CMTM6Q9NX76 183 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 GDF2Q9UK05 429 aaPredicted RBP12.61□□□□□ -0.39
HMGN3-201ENST00000275036 SLC7A7Q9UM01 511 aa12.61□□□□□ -0.39
HMGN3-201ENST00000275036 OR6C65A6NJZ3 312 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 RPL36A-HNRNPH2H7BZ11 118 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 PLPP3O14495 311 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 SLC22A2O15244 555 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 NQO1P15559 274 aaKnown RBP12.6□□□□□ -0.39
HMGN3-201ENST00000275036 PRPS1P60891 318 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 IL1RL1Q01638 556 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 ROR2Q01974 943 aaKnown RBP12.6□□□□□ -0.39
HMGN3-201ENST00000275036 TNK1Q13470 666 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 C1DQ13901 141 aaKnown RBP12.6□□□□□ -0.39
HMGN3-201ENST00000275036 VEZF1Q14119 521 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 MFSD13AQ14CX5 517 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 SLC22A25Q6T423 547 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 DTX2Q86UW9 622 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 CARM1Q86X55 608 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 TREML1Q86YW5 311 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 SCAIQ8N9R8 606 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 PCYOX1LQ8NBM8 494 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 TXNDC15Q96J42 360 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 PRSS27Q9BQR3 290 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 ZNF426Q9BUY5 554 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 EMC6Q9BV81 110 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 GPR35Q9HC97 309 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 GID8Q9NWU2 228 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 MED29Q9NX70 200 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 MRPL39Q9NYK5 338 aaKnown RBP12.6□□□□□ -0.39
HMGN3-201ENST00000275036 MGAT4BQ9UQ53 548 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 SH3GLB1Q9Y371 365 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 CORINQ9Y5Q5 1042 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 RTTNQ86VV8 2226 aa12.6□□□□□ -0.39
HMGN3-201ENST00000275036 CHD3Q12873 2000 aaKnown RBP12.59□□□□□ -0.39
HMGN3-201ENST00000275036 A0A096LPE4 126 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 A0A1W2PPZ6 126 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 TRAPPC13A5PLN9 417 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 FAM220BPB1ANY3 271 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 ATP8B1O43520 1251 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 SHOX2O60902 331 aaPredicted RBP12.59□□□□□ -0.39
HMGN3-201ENST00000275036 SLC43A1O75387 559 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 COX4I1P13073 169 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 TUBA1BP68363 451 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 TUBA4AP68366 448 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 POU3F1Q03052 451 aaPredicted RBP12.59□□□□□ -0.39
HMGN3-201ENST00000275036 PUDPQ08623 228 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 PMS2P3Q13401 168 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 ZNF74Q16587 644 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 C11orf71Q6IPW1 123 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 ERICH5Q6P6B1 374 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 DNM1P46Q6ZS02 220 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 TUBA1AQ71U36 451 aa12.59□□□□□ -0.39
HMGN3-201ENST00000275036 UEVLDQ8IX04 471 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms