RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 TXNL4BQ9NX01 149 aaKnown RBP10.6□□□□□ -0.71
USP53-201ENST00000274030 CLDN24A6NM45 220 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 ENSAO43768 121 aaKnown RBP10.6□□□□□ -0.71
USP53-201ENST00000274030 SLCO2B1O94956 709 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 ABHD16AO95870 558 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 PTGER4P35408 488 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 TRIM23P36406 574 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 CARD18P57730 90 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 TRMT12Q53H54 448 aaKnown RBP10.6□□□□□ -0.71
USP53-201ENST00000274030 FRMD1Q8N878 549 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 BHLHE23Q8NDY6 225 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 NEURL3Q96EH8 262 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 DCLRE1CQ96SD1 692 aaKnown RBP10.6□□□□□ -0.71
USP53-201ENST00000274030 FOXQ1Q9C009 403 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 RNF32Q9H0A6 362 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 PPP1R14DQ9NXH3 145 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.6□□□□□ -0.71
USP53-201ENST00000274030 A0A1W2PS29 197 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 ZNF705FA8MVS1 300 aaPredicted RBP10.6□□□□□ -0.71
USP53-201ENST00000274030 PRKNO60260 465 aaPredicted RBP10.6□□□□□ -0.71
USP53-201ENST00000274030 ABLIM3O94929 683 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 RAB40ALP0C0E4 278 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 ZNF705DP0CH99 300 aaPredicted RBP10.6□□□□□ -0.71
USP53-201ENST00000274030 ZNF705BP0CI00 300 aaPredicted RBP10.6□□□□□ -0.71
USP53-201ENST00000274030 PKLRP30613 574 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 C17orf67Q0P5P2 114 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 MLF2Q15773 248 aaPredicted RBP10.6□□□□□ -0.71
USP53-201ENST00000274030 SPRED1Q7Z699 444 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 TPRA1Q86W33 373 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 OR7G1Q8NGA0 311 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 PFN4Q8NHR9 129 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 ZFAND1Q8TCF1 268 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 RAB40AQ8WXH6 277 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 ZNF419Q96HQ0 510 aaPredicted RBP10.6□□□□□ -0.71
USP53-201ENST00000274030 NMNAT2Q9BZQ4 307 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 ATP13A2Q9NQ11 1180 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 GNG12Q9UBI6 72 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 OR2T7P0C7T2 308 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 HMGA1P17096 107 aaKnown RBP10.6□□□□□ -0.71
USP53-201ENST00000274030 HTD2P86397 168 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 EGFL6Q8IUX8 553 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 PLPP7Q8NBV4 271 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 DMBX1Q8NFW5 382 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 OR2T27Q8NH04 317 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 HAS2Q92819 552 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 PIGTQ969N2 578 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 BORCS7Q96B45 105 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 PRMT8Q9NR22 394 aaPredicted RBP10.6□□□□□ -0.71
USP53-201ENST00000274030 NDUFAF4Q9P032 175 aa10.6□□□□□ -0.71
USP53-201ENST00000274030 MRPS28Q9Y2Q9 187 aaKnown RBP10.6□□□□□ -0.71
USP53-201ENST00000274030 A0A087WUU8 490 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 A0A0B4J2A0 478 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 TMEM82A0PJX8 343 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 SELENOFO60613 162 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 CSO75390 466 aaKnown RBP10.59□□□□□ -0.71
USP53-201ENST00000274030 ICAM2P13598 275 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 TEAD1P28347 426 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 MC2RQ01718 297 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 BDH1Q02338 343 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 DUSP7Q16829 419 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 PLK5Q496M5 336 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 GLYR1Q49A26 553 aaPredicted RBP10.59□□□□□ -0.71
USP53-201ENST00000274030 HSF5Q4G112 596 aaPredicted RBP10.59□□□□□ -0.71
USP53-201ENST00000274030 FGGYQ96C11 551 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 TWSG1Q9GZX9 223 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 ANKRD19PQ9H560 264 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 TBC1D29Q9UFV1 150 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 SLC23A2Q9UGH3 650 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 SHPKQ9UHJ6 478 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 TRAV36DV7A0A075B6V5 113 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 SFXN4Q6P4A7 337 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 SUMF2Q8NBJ7 301 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 UBTD2Q8WUN7 234 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 PPA2Q9H2U2 334 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 C6orf106Q9H6K1 298 aaPredicted RBP10.59□□□□□ -0.71
USP53-201ENST00000274030 RAB9BQ9NP90 201 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 MCRIP1C9JLW8 97 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 TMX2-CTNND1H3BSU7 103 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 RAB27BO00194 218 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 EFSO43281 561 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 GPRIN2O60269 458 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 TUSC2O75896 110 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 DDAH2O95865 285 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 ARNTP27540 789 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 FAM26DQ5JW98 314 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 MFSD12Q6NUT3 480 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 WDSUB1Q8N9V3 476 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 CHTF18Q8WVB6 975 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 Q96M85 177 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 EMC6Q9BV81 110 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 POM121BA6NF01 834 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 TMEM212A6NML5 194 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 M0QYG6 137 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 FADS1O60427 444 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 MED6O75586 246 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 SLC35E2P0CK97 266 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 SHEQ5VZ18 495 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 CST9LP1Q5W188 147 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 ZNF836Q6ZNA1 936 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 VN1R2Q8NFZ6 395 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms