RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 RPS5P46782 204 aaKnown RBP7.73□□□□□ -1.17
TPM3-201ENST00000271850 PPOXP50336 477 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 SNRPD2P62316 118 aaKnown RBP7.73□□□□□ -1.17
TPM3-201ENST00000271850 TXNL4AP83876 142 aaKnown RBP7.73□□□□□ -1.17
TPM3-201ENST00000271850 ARF1P84077 181 aaKnown RBP7.73□□□□□ -1.17
TPM3-201ENST00000271850 ROR2Q01974 943 aaKnown RBP7.73□□□□□ -1.17
TPM3-201ENST00000271850 TNP2Q05952 138 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 STX3Q13277 289 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 RIN1Q13671 783 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 CARTPTQ16568 116 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 CR1LQ2VPA4 569 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 C3orf36Q3SXR2 165 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 GLIPR1L2Q4G1C9 344 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 PDCD4Q53EL6 469 aaKnown RBP7.73□□□□□ -1.17
TPM3-201ENST00000271850 C1QTNF12Q5T7M4 302 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 PRAMEF8Q5VWM4 474 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 PRAMEF7Q5VXH5 474 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 C6orf89Q6UWU4 347 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 MDP1Q86V88 176 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 CARM1Q86X55 608 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 PEX5LQ8IYB4 626 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 ZNF440Q8IYI8 595 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 SVOPLQ8N434 492 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 STK35Q8TDR2 534 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 TAAR8Q969N4 342 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 OR52B2Q96RD2 323 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 VRK1Q99986 396 aaPredicted RBP7.73□□□□□ -1.17
TPM3-201ENST00000271850 SPATA9Q9BWV2 254 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 KRTAP9-9Q9BYP9 154 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 KRTAP9-4Q9BYQ2 154 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 PAIP1Q9H074 479 aaKnown RBP7.73□□□□□ -1.17
TPM3-201ENST00000271850 TPT1P8Q9HAU6 139 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 GPR35Q9HC97 309 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 SLC25A37Q9NYZ2 338 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 P2RX2Q9UBL9 471 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 FKBP7Q9Y680 259 aa7.73□□□□□ -1.17
TPM3-201ENST00000271850 ELOA3CA0A087WX78 387 aaPredicted RBP7.72□□□□□ -1.17
TPM3-201ENST00000271850 MS4A18H0YCH9 400 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 hCG_2039718K7EN88 272 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 M0R082 166 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 WNT9BO14905 357 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 RGS16O15492 202 aaPredicted RBP7.72□□□□□ -1.17
TPM3-201ENST00000271850 TPST1O60507 370 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 TGFAP01135 160 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 KITP10721 976 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 CBR1P16152 277 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 CRATP43155 626 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 IDH3GP51553 393 aaPredicted RBP7.72□□□□□ -1.17
TPM3-201ENST00000271850 CRISP3P54108 245 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 CLDN17P56750 224 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 DSTNP60981 165 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 CEACAM16Q2WEN9 425 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 MS4A18Q3C1V0 323 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 ARSJQ5FYB0 599 aaPredicted RBP7.72□□□□□ -1.17
TPM3-201ENST00000271850 ATG16L1Q676U5 607 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 TMEM225Q6GV28 225 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 KLHL24Q6TFL4 600 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 SLC46A3Q7Z3Q1 461 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 TRIML2Q8N7C3 387 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 FAM169BQ8N8A8 192 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 MFSD8Q8NHS3 518 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 ZNF417Q8TAU3 575 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 GTF2H4Q92759 462 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 OR2M2Q96R28 347 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 ZNF587Q96SQ5 575 aaPredicted RBP7.72□□□□□ -1.17
TPM3-201ENST00000271850 ZNF442Q9H7R0 627 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 BCL2L10Q9HD36 194 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 SLC52A3Q9NQ40 469 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 SDR39U1Q9NRG7 319 aaPredicted RBP7.72□□□□□ -1.17
TPM3-201ENST00000271850 B3GNT2Q9NY97 397 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 SLAMF8Q9P0V8 285 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 MYEF2Q9P2K5 600 aaKnown RBP7.72□□□□□ -1.17
TPM3-201ENST00000271850 RCE1Q9Y256 329 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 RASD1Q9Y272 281 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 PCDHB14Q9Y5E9 798 aa7.72□□□□□ -1.17
TPM3-201ENST00000271850 A0A1B0GWA3 101 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 LRRN3E7EW58 273 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 HDAC3O15379 428 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 SLC22A3O75751 556 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 SNUPNO95149 360 aaKnown RBP7.71□□□□□ -1.18
TPM3-201ENST00000271850 VAMP5O95183 116 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 KRT75O95678 551 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 CRYAAP02489 173 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 DAOP14920 347 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 ZNF14P17017 642 aaPredicted RBP7.71□□□□□ -1.18
TPM3-201ENST00000271850 CBLP22681 906 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 GRPRP30550 384 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 UBE2NP61088 152 aaKnown RBP7.71□□□□□ -1.18
TPM3-201ENST00000271850 GNA13Q14344 377 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 RGNQ15493 299 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 IQCCQ4KMZ1 466 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 ELFN2Q5R3F8 820 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 KRT80Q6KB66 452 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 SLC2A7Q6PXP3 512 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 SPATA21Q7Z572 469 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 LRP11Q86VZ4 500 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 ZNF584Q8IVC4 421 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 FUNDC1Q8IVP5 155 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 ANKRD42Q8N9B4 389 aa7.71□□□□□ -1.18
TPM3-201ENST00000271850 GLB1L3Q8NCI6 653 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms