RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TFPIP10646 304 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 SPI1P17947 270 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 ATP6V1E1P36543 226 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 CD96P40200 585 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 DNASE1L1P49184 302 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 SOX8P57073 446 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 RPS7P62081 194 aaKnown RBP14.73□□□□□ -0.05
TPM1-201ENST00000267996 POU4F2Q12837 409 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 NFATC3Q12968 1075 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 MYBPHQ13203 477 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 OR7A5Q15622 319 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 SSX1Q16384 188 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 MS4A18Q3C1V0 323 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 GLYR1Q49A26 553 aaPredicted RBP14.73□□□□□ -0.05
TPM1-201ENST00000267996 LEG1Q6P5S2 330 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 H1FNTQ75WM6 255 aaPredicted RBP14.73□□□□□ -0.05
TPM1-201ENST00000267996 ATCAYQ86WG3 371 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 ARIH2OSQ8N7S6 290 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 ATP6V1C2Q8NEY4 427 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 OR5M1Q8NGP8 315 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 OR52N1Q8NH53 320 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 ZNF519Q8TB69 540 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 SNX18Q96RF0 628 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 TXNIPQ9H3M7 391 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 CHST11Q9NPF2 352 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 ASB6Q9NWX5 421 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 CNTRLQ7Z7A1 2325 aa14.73□□□□□ -0.05
TPM1-201ENST00000267996 PTPRZ1P23471 2315 aaPredicted RBP14.72□□□□□ -0.05
TPM1-201ENST00000267996 NPIPB13A6NJU9 1138 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 LRRC3CA6NJW4 275 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 NPIPB4C9JG80 1138 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 C11orf98E9PRG8 122 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 H3BML4 177 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 CCRL2O00421 344 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 RNF13O43567 381 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 OR6A2O95222 327 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 ZNF17P17021 662 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 ITGA3P26006 1051 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 RPL27P61353 136 aaKnown RBP14.72□□□□□ -0.05
TPM1-201ENST00000267996 PUDPQ08623 228 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 PON3Q15166 354 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 TSTQ16762 297 aaKnown RBP14.72□□□□□ -0.05
TPM1-201ENST00000267996 LINC01590Q5TEZ4 76 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 OR2G6Q5TZ20 316 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 LCN1P1Q5VSP4 162 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 TUBA3EQ6PEY2 450 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 LHFPL3Q86UP9 236 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 JAZF1Q86VZ6 243 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 TMEM99Q8N816 258 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 CLEC1AQ8NC01 280 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 ADPRHL1Q8NDY3 354 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 ZNRF4Q8WWF5 429 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 UBL7Q96S82 380 aaPredicted RBP14.72□□□□□ -0.05
TPM1-201ENST00000267996 TIMMDC1Q9NPL8 285 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 DEPPQ9NTK1 212 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 LRFN1Q9P244 771 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 ABI3Q9P2A4 366 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 B3GALT5Q9Y2C3 310 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 HDGFL3Q9Y3E1 203 aa14.72□□□□□ -0.05
TPM1-201ENST00000267996 C12orf71A8MTZ7 269 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 SLC22A1O15245 554 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 NEURL1O76050 574 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 CNR1P21554 472 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 NR4A1P22736 598 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 GADD45AP24522 165 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 SHC1P29353 583 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 SRD5A2P31213 254 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 SLC16A1P53985 500 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 OC90Q02509 493 aaPredicted RBP14.71□□□□□ -0.05
TPM1-201ENST00000267996 SPCS2Q15005 226 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 ACKR1Q16570 336 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 ZNF239Q16600 458 aaKnown RBP14.71□□□□□ -0.05
TPM1-201ENST00000267996 ADCK1Q86TW2 530 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 POMGNT2Q8NAT1 580 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 THAP4Q8WY91 577 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 TM9SF4Q92544 642 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 RPL3LQ92901 407 aaKnown RBP14.71□□□□□ -0.05
TPM1-201ENST00000267996 NXPE2Q96DL1 559 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 TIMP4Q99727 224 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 ARHGAP9Q9BRR9 750 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 MOKQ9UQ07 419 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 CAB39Q9Y376 341 aaPredicted RBP14.71□□□□□ -0.05
TPM1-201ENST00000267996 MRPS18CQ9Y3D5 142 aaKnown RBP14.71□□□□□ -0.05
TPM1-201ENST00000267996 ALPK2Q86TB3 2170 aa14.71□□□□□ -0.05
TPM1-201ENST00000267996 A0A1W2PNV4 684 aa14.71□□□□□ -0.06
TPM1-201ENST00000267996 GLCEO94923 617 aa14.71□□□□□ -0.06
TPM1-201ENST00000267996 CPEP16870 476 aa14.71□□□□□ -0.06
TPM1-201ENST00000267996 TCEA1P23193 301 aaKnown RBP14.71□□□□□ -0.06
TPM1-201ENST00000267996 AHCYP23526 432 aa14.71□□□□□ -0.06
TPM1-201ENST00000267996 CD79BP40259 229 aa14.71□□□□□ -0.06
TPM1-201ENST00000267996 CASRP41180 1078 aa14.71□□□□□ -0.06
TPM1-201ENST00000267996 SH3BGRP55822 239 aaPredicted RBP14.71□□□□□ -0.06
TPM1-201ENST00000267996 ACSM1Q08AH1 577 aa14.71□□□□□ -0.06
TPM1-201ENST00000267996 TPBGQ13641 420 aa14.71□□□□□ -0.06
TPM1-201ENST00000267996 GALEQ14376 348 aa14.71□□□□□ -0.06
TPM1-201ENST00000267996 ATP1A1-AS1Q5TC04 95 aa14.71□□□□□ -0.06
TPM1-201ENST00000267996 NHLRC1Q6VVB1 395 aa14.71□□□□□ -0.06
TPM1-201ENST00000267996 VASH2Q86V25 355 aa14.71□□□□□ -0.06
TPM1-201ENST00000267996 KLHL36Q8N4N3 616 aa14.71□□□□□ -0.06
TPM1-201ENST00000267996 SMPDL3BQ92485 455 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms