RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 MRPL49Q13405 166 aaKnown RBP13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 BICRALQ6AI39 1079 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 S100A16Q96FQ6 103 aaKnown RBP13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 FAM71F1Q96KD3 344 aaPredicted RBP13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 CALHM2Q9HA72 323 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 SSNA1O43805 119 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 DPM1O60762 260 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 SMIM18P0DKX4 95 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 NAGAP17050 411 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 NPSR1Q6W5P4 371 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 SLC22A16Q86VW1 577 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 ANKRD13BQ86YJ7 626 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 POGLUT1Q8NBL1 392 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 GPR119Q8TDV5 335 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 KTI12Q96EK9 354 aaPredicted RBP13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 TSSK2Q96PF2 358 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 RHNO1Q9BSD3 238 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 CHST11Q9NPF2 352 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 KLF13Q9Y2Y9 288 aaPredicted RBP13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 SNPHO15079 494 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 SLC43A1O75387 559 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 HOXA6P31267 233 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 ADH7P40394 386 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 CASP6P55212 293 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 AP3S2P59780 193 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 CD226Q15762 336 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 GPR148Q8TDV2 347 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 SP140LQ9H930 580 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 TMEM269A0A1B0GVZ9 245 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 FFAR1O14842 300 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 TPD52L2O43399 206 aaKnown RBP13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 GALNSP34059 522 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 VASH2Q86V25 355 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 LINC00346Q8IVM7 164 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 BBS1Q8NFJ9 593 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 TMEM41AQ96HV5 264 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 TSPAN10Q9H1Z9 355 aaPredicted RBP13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 FBXO8Q9NRD0 319 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 NOSIPQ9Y314 301 aaKnown RBP13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 AK6Q9Y3D8 172 aaKnown RBP13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 SELENOFO60613 162 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 CBR3O75828 277 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 GP1BAP07359 652 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 HSF1Q00613 529 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 UTS2BQ765I0 119 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 OR13F1Q8NGS4 319 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 NUBPLQ8TB37 319 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 SPTSSAQ969W0 71 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 IFT46Q9NQC8 304 aa13.17□□□□□ -0.3
PDLIM2-201ENST00000265810 ANKUB1A6NFN9 424 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 ECDO95905 644 aaPredicted RBP13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 TBX6O95947 436 aaPredicted RBP13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 DHFRP00374 187 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 FKBP2P26885 142 aaKnown RBP13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 CBX3Q13185 183 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 B3GNTL1Q67FW5 361 aaPredicted RBP13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 BORAQ6PGQ7 559 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 PEG10Q86TG7 708 aaKnown RBP13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 BCL7BQ9BQE9 202 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 AICDAQ9GZX7 198 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 DUSP21Q9H596 190 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 MED29Q9NX70 200 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 GRIP1Q9Y3R0 1128 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 PI4KAP42356 2102 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 GLCEO94923 617 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 PLATP00750 562 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 SDHAP31040 664 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 FAM131CQ96AQ9 280 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 RASL10BQ96S79 203 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 PARPBPQ9NWS1 579 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 COA3Q9Y2R0 106 aaPredicted RBP13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 CENPVL1A0A0U1RR11 272 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 UBE2QL1A1L167 161 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 METTL15A6NJ78 407 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 ZNF701M0R085 212 aaPredicted RBP13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 DLGAP1O14490 977 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 PRSS23O95084 383 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 SERPINA7P05543 415 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 SBK2P0C263 348 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 TSPAN5P62079 268 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 C9orf40Q8IXQ3 194 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 ARIH2OSQ8N7S6 290 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 SLC25A19Q9HC21 320 aa13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 CHMP1AQ9HD42 196 aaPredicted RBP13.16□□□□□ -0.3
PDLIM2-201ENST00000265810 SUMO3P55854 103 aaPredicted RBP13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 SPCS2Q15005 226 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 C11orf91Q3C1V1 193 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 FAM205BPQ63HN1 556 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 ZNF704Q6ZNC4 412 aaPredicted RBP13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 WDR76Q9H967 626 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 ZNF639Q9UID6 485 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 B4E171 279 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 SURF4O15260 269 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 CBFA2T3O75081 653 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 KDM4BO94953 1096 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 NTN1O95631 604 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 ANKRD34CP0C6C1 535 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 ABOP16442 354 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 TSPAN7P41732 249 aa13.15□□□□□ -0.3
PDLIM2-201ENST00000265810 EIF2B2P49770 351 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms