RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 ATP4BP51164 291 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 NUDT6P53370 316 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 DSCR9P59020 149 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 MST1LQ2TV78 715 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 TBRG1Q3YBR2 411 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 GLIPR1L2Q4G1C9 344 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 AGKQ53H12 422 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 TTMPQ5BVD1 217 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 FAM69AQ5T7M9 428 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 NIPAL3Q6P499 406 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 ULK3Q6PHR2 472 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 KLHL24Q6TFL4 600 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 DLEU7Q6UYE1 221 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 H1FNTQ75WM6 255 aaPredicted RBP8.48□□□□□ -1.05
VPS41-201ENST00000265745 NET1Q7Z628 596 aaPredicted RBP8.48□□□□□ -1.05
VPS41-201ENST00000265745 KRT73Q86Y46 540 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 MAGEE2Q8TD90 523 aaPredicted RBP8.48□□□□□ -1.05
VPS41-201ENST00000265745 DNAJA4Q8WW22 397 aaPredicted RBP8.48□□□□□ -1.05
VPS41-201ENST00000265745 HTRA1Q92743 480 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 MDFIQ99750 246 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 SPATA5L1Q9BVQ7 753 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 LINC00470Q9BZP3 86 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 TMEM38AQ9H6F2 299 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 RPS6KB2Q9UBS0 482 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 SEC14L4Q9UDX3 406 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 MOKQ9UQ07 419 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 RCE1Q9Y256 329 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 ATRQ13535 2644 aa8.48□□□□□ -1.05
VPS41-201ENST00000265745 TRAV36DV7A0A075B6V5 113 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 ARPC4-TTLL3A0A0A6YYG9 625 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 PRORSD1PA6NEY8 169 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 EVPLLA8MZ36 301 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 RPL36A-HNRNPH2H7BZ11 118 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 M0R082 166 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 GPRIN2O60269 458 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 TPST2O60704 377 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 SERPINB7O75635 380 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 BMP4P12644 408 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 SLC6A2P23975 617 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 EFNA4P52798 201 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 CLDN17P56750 224 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 UBE2NP61088 152 aaKnown RBP8.47□□□□□ -1.05
VPS41-201ENST00000265745 ARF1P84077 181 aaKnown RBP8.47□□□□□ -1.05
VPS41-201ENST00000265745 ROR2Q01974 943 aaKnown RBP8.47□□□□□ -1.05
VPS41-201ENST00000265745 CHRNB3Q05901 458 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 SCARB2Q14108 478 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 SQLEQ14534 574 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 RUNDC3AQ59EK9 446 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 ALG10BQ5I7T1 473 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 FAM91A1Q658Y4 838 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 HMBOX1Q6NT76 420 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 ANKRD16Q6P6B7 361 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 CLEC2AQ6UVW9 174 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 C5orf46Q6UWT4 87 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 SYT9Q86SS6 491 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 ZNF525Q8N782 197 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 FAM169BQ8N8A8 192 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 ZNF417Q8TAU3 575 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 SLC38A4Q969I6 547 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 SLC47A1Q96FL8 570 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 SLC41A3Q96GZ6 507 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 ALKBH3Q96Q83 286 aaPredicted RBP8.47□□□□□ -1.05
VPS41-201ENST00000265745 SLC38A2Q96QD8 506 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 ZNF587Q96SQ5 575 aaPredicted RBP8.47□□□□□ -1.05
VPS41-201ENST00000265745 WFDC6Q9BQY6 131 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 KATNB1Q9BVA0 655 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 NELFAQ9H3P2 528 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 RABEP2Q9H5N1 569 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 CRNNQ9UBG3 495 aaPredicted RBP8.47□□□□□ -1.05
VPS41-201ENST00000265745 CORO2BQ9UQ03 480 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 PMF1-BGLAPU3KQ54 211 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 PLCE1Q9P212 2302 aa8.47□□□□□ -1.05
VPS41-201ENST00000265745 ABCA1O95477 2261 aa8.46□□□□□ -1.05
VPS41-201ENST00000265745 A0A087WUJ7 227 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 A0A0B4J2E0 115 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 A0A1B0GX12 115 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 MS4A18H0YCH9 400 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 AIM2O14862 343 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 SLC43A1O75387 559 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 MFN2O95140 757 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 IGLV1-44P01699 117 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 GTF2E2P29084 291 aaKnown RBP8.46□□□□□ -1.06
VPS41-201ENST00000265745 AQP1P29972 269 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 GRPRP30550 384 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 SERPINF1P36955 418 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 SH3BGRP55822 239 aaPredicted RBP8.46□□□□□ -1.06
VPS41-201ENST00000265745 TUBA1BP68363 451 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 TUBA4AP68366 448 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 NAAAQ02083 359 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 LOXL1Q08397 574 aaPredicted RBP8.46□□□□□ -1.06
VPS41-201ENST00000265745 C1DQ13901 141 aaKnown RBP8.46□□□□□ -1.06
VPS41-201ENST00000265745 MFSD13AQ14CX5 517 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 OR1Q1Q15612 314 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 MS4A18Q3C1V0 323 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 C3orf36Q3SXR2 165 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 NHLRC1Q6VVB1 395 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 TUBA1AQ71U36 451 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 DPP10Q8N608 796 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 ADPRHL1Q8NDY3 354 aa8.46□□□□□ -1.06
VPS41-201ENST00000265745 HIPK4Q8NE63 616 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms