RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 PRR7Q8TB68 274 aa12.69□□□□□ -0.38
SSBP1-201ENST00000265304 RND1Q92730 232 aa12.69□□□□□ -0.38
SSBP1-201ENST00000265304 FAM46AQ96IP4 442 aaKnown RBP12.69□□□□□ -0.38
SSBP1-201ENST00000265304 TNFRSF13CQ96RJ3 184 aa12.69□□□□□ -0.38
SSBP1-201ENST00000265304 SFXN3Q9BWM7 321 aa12.69□□□□□ -0.38
SSBP1-201ENST00000265304 JKAMPQ9P055 326 aa12.69□□□□□ -0.38
SSBP1-201ENST00000265304 STX18Q9P2W9 335 aaKnown RBP12.69□□□□□ -0.38
SSBP1-201ENST00000265304 REV1Q9UBZ9 1251 aa12.69□□□□□ -0.38
SSBP1-201ENST00000265304 Q9UFV3 132 aa12.69□□□□□ -0.38
SSBP1-201ENST00000265304 SLC5A6Q9Y289 635 aa12.69□□□□□ -0.38
SSBP1-201ENST00000265304 ICE1Q9Y2F5 2266 aa12.69□□□□□ -0.38
SSBP1-201ENST00000265304 PTPN13Q12923 2485 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 IGHV3-15A0A0B4J1V0 119 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 G3V2T6 193 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 J3QKU1 62 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 ZNF432O94892 652 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 CNOT4O95628 575 aaKnown RBP12.68□□□□□ -0.38
SSBP1-201ENST00000265304 IGHMP01871 453 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 HIST1H2ABP04908 130 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 CD8BP10966 210 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 APEHP13798 732 aaKnown RBP12.68□□□□□ -0.38
SSBP1-201ENST00000265304 PTNP21246 168 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 AGTR1P30556 359 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 GPR4P46093 362 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 PPP2R2BQ00005 443 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 RPL18Q07020 188 aaKnown RBP12.68□□□□□ -0.38
SSBP1-201ENST00000265304 FOXF2Q12947 444 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 TAF11Q15544 211 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 KDM4DQ6B0I6 523 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 PLXDC2Q6UX71 529 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 HIST3H2AQ7L7L0 130 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 ZDHHC13Q8IUH4 622 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 PARP8Q8N3A8 854 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 AQP11Q8NBQ7 271 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 ANKK1Q8NFD2 765 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 OR6K3Q8NGY3 331 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 STMN2Q93045 179 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 HIST1H2ACQ93077 130 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 STARD4Q96DR4 205 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 CCDC120Q96HB5 630 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 PRRG4Q9BZD6 226 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 MCCC2Q9HCC0 563 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 EMC3Q9P0I2 261 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 PDP1Q9P0J1 537 aaPredicted RBP12.68□□□□□ -0.38
SSBP1-201ENST00000265304 ERRFI1Q9UJM3 462 aaPredicted RBP12.68□□□□□ -0.38
SSBP1-201ENST00000265304 RCE1Q9Y256 329 aa12.68□□□□□ -0.38
SSBP1-201ENST00000265304 DOPEY2Q9Y3R5 2298 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 UNC119BA6NIH7 251 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 CENPBD1B2RD01 187 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 E9PQ18 207 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 CASQ2O14958 399 aaPredicted RBP12.67□□□□□ -0.38
SSBP1-201ENST00000265304 ARPC3O15145 178 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 E2F6O75461 281 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 TMIGD3P0DMS9 266 aaPredicted RBP12.67□□□□□ -0.38
SSBP1-201ENST00000265304 SAGP10523 405 aaPredicted RBP12.67□□□□□ -0.38
SSBP1-201ENST00000265304 ANPEPP15144 967 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 GTF2E2P29084 291 aaKnown RBP12.67□□□□□ -0.38
SSBP1-201ENST00000265304 OPRM1P35372 400 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 SRSF1Q07955 248 aaKnown RBP eCLIP12.67□□□□□ -0.38
SSBP1-201ENST00000265304 LAPTM4AQ15012 233 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 RFX4Q33E94 735 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 FBXL19-AS1Q494R0 122 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 RPL13AP3Q6NVV1 102 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 ZNF620Q6ZNG0 422 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 P4HA3Q7Z4N8 544 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 NANOGNBQ7Z5D8 188 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 GALNT5Q7Z7M9 940 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 HS3ST5Q8IZT8 346 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 C10orf53Q8N6V4 93 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 OR13C2Q8NGS9 318 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 LILRB4Q8NHJ6 448 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 DNAJA3Q96EY1 480 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 ENKD1Q9H0I2 346 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 NRIP3Q9NQ35 241 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 PARPBPQ9NWS1 579 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 USE1Q9NZ43 259 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 TMEFF2Q9UIK5 374 aaPredicted RBP12.67□□□□□ -0.38
SSBP1-201ENST00000265304 OAZ3Q9UMX2 235 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 RNF6Q9Y252 685 aa12.67□□□□□ -0.38
SSBP1-201ENST00000265304 MAGED1Q9Y5V3 778 aaPredicted RBP12.67□□□□□ -0.38
SSBP1-201ENST00000265304 RTTNQ86VV8 2226 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 IDH3BO43837 385 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 NDUFB2O95178 105 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 TXNDC12O95881 172 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 ADORA3P0DMS8 318 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 ZNF43P17038 809 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 PRKACGP22612 351 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 CHRNB4P30926 498 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 AQP2P41181 271 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 OR3A2P47893 321 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 DAPP51397 102 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 PER3P56645 1201 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 ARMC4Q5T2S8 1044 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 XKRXQ6PP77 449 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 SMARCD3Q6STE5 483 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 DPY19L2P2Q6ZN68 376 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 FAM122BQ7Z309 247 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 FJX1Q86VR8 437 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 KIF18BQ86Y91 864 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 TUSC5Q8IXB3 177 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms