RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 MAU2Q9Y6X3 613 aa10.12□□□□□ -0.79
MSH3-201ENST00000265081 OR6C70A6NIJ9 312 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 RHPN2P1A8MT19 583 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 ZNF254O75437 659 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 IFNA16P05015 189 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 FBLP22087 321 aaKnown RBP10.11□□□□□ -0.79
MSH3-201ENST00000265081 TACR3P29371 465 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 CENPAP49450 140 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 SGCBQ16585 318 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 C5orf46Q6UWT4 87 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 TTLL10Q6ZVT0 673 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 SAMD12Q8N8I0 201 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 ENKURQ8TC29 256 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 STK35Q8TDR2 534 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 ADAMTS14Q8WXS8 1223 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 CCDC86Q9H6F5 360 aaKnown RBP10.11□□□□□ -0.79
MSH3-201ENST00000265081 CAPN10Q9HC96 672 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 KLHL1Q9NR64 748 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 FTCDNL1E5RQL4 147 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 DCTN6O00399 190 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 FLRT2O43155 660 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 SCO2O43819 266 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 SRSF10O75494 262 aaKnown RBP10.11□□□□□ -0.79
MSH3-201ENST00000265081 WISP1O95388 367 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 PAHP00439 452 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 CYC1P08574 325 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 SF3B4Q15427 424 aaKnown RBP eCLIP10.11□□□□□ -0.79
MSH3-201ENST00000265081 TEX30Q5JUR7 227 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 ZNF385CQ66K41 422 aaPredicted RBP10.11□□□□□ -0.79
MSH3-201ENST00000265081 GLCCI1Q86VQ1 547 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 EID2Q8N6I1 236 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 GPR119Q8TDV5 335 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 SLC25A38Q96DW6 304 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 HSPA12BQ96MM6 686 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 OR14A2Q96R54 314 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 TRBV2A0A0J9YWF9 115 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 PHYHO14832 338 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 ZFPL1O95159 310 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 CALCBP10092 127 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 ALOX5APP20292 161 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 ABCD3P28288 659 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 PTGS2P35354 604 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 PITPNAQ00169 270 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 ZP4Q12836 540 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 IKZF1Q13422 519 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 PCK2Q16822 640 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 RHBDD2Q6NTF9 364 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 IL20RBQ6UXL0 311 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 NOXA1Q86UR1 476 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 MISPQ8IVT2 679 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 OR6V1Q8N148 313 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 OR4D9Q8NGE8 314 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 PHOSPHO1Q8TCT1 267 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 SMIM4Q8WVI0 70 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 DAZLQ92904 295 aaKnown RBP10.11□□□□□ -0.79
MSH3-201ENST00000265081 UTP23Q9BRU9 249 aaKnown RBP10.11□□□□□ -0.79
MSH3-201ENST00000265081 IER2Q9BTL4 223 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 GHITMQ9H3K2 345 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 PNO1Q9NRX1 252 aaKnown RBP10.11□□□□□ -0.79
MSH3-201ENST00000265081 FRRS1LQ9P0K9 344 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 CACNG2Q9Y698 323 aa10.11□□□□□ -0.79
MSH3-201ENST00000265081 IGLV3-32A0A0A0MS00 114 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 C1QBP02746 253 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 GSTT2P0CG29 244 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 GSTT2BP0CG30 244 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 ARSBP15848 533 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 BCKDHBP21953 392 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 HOXA6P31267 233 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 NAA10P41227 235 aaPredicted RBP10.1□□□□□ -0.79
MSH3-201ENST00000265081 OR1D4P47884 311 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 P2RX1P51575 399 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 NKX2-5P52952 324 aaPredicted RBP10.1□□□□□ -0.79
MSH3-201ENST00000265081 ROM1Q03395 351 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 GXYLT1Q4G148 440 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 HGDQ93099 445 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 GNG8Q9UK08 70 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 IFITM5A6NNB3 132 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 MAOBP27338 520 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 MECP2P51608 486 aaKnown RBP10.1□□□□□ -0.79
MSH3-201ENST00000265081 AFF3P51826 1226 aaKnown RBP10.1□□□□□ -0.79
MSH3-201ENST00000265081 RRAS2P62070 204 aaPredicted RBP10.1□□□□□ -0.79
MSH3-201ENST00000265081 CBFBQ13951 182 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 SLC25A53Q5H9E4 307 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 PLET1Q6UQ28 207 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 LYPD4Q6UWN0 246 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 NHLRC1Q6VVB1 395 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 MCHR2Q969V1 340 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 WDR76Q9H967 626 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 MPDZO75970 2070 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 IGLV1-36A0A0B4J1U3 117 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 A8MU76 341 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 PDCD5O14737 125 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 MAGEB4O15481 346 aaPredicted RBP10.1□□□□□ -0.79
MSH3-201ENST00000265081 SULT1B1O43704 296 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 RAF1P04049 648 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 KRT8P05787 483 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 EDNRAP25101 427 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 EVI2BP34910 448 aa10.1□□□□□ -0.79
MSH3-201ENST00000265081 RPL4P36578 427 aaKnown RBP10.1□□□□□ -0.79
MSH3-201ENST00000265081 POLR2HP52434 150 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms