RNA–Protein interactions for RNA: ENST00000264001.8

CKLF-201, Transcript of chemokine like factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CKLF, Length 669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-201ENST00000264001 CORINQ9Y5Q5 1042 aa17.63■□□□□ 0.41
CKLF-201ENST00000264001 CHD3Q12873 2000 aaKnown RBP17.63■□□□□ 0.41
CKLF-201ENST00000264001 ABCA1O95477 2261 aa17.63■□□□□ 0.41
CKLF-201ENST00000264001 A0A096LPE4 126 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 LOC102725191A0A1B0GVB3 256 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 A0A1W2PPZ6 126 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 ATP6V1G2-DDX39BF2Z307 99 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 MS4A18H0YCH9 400 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 RPL36A-HNRNPH2H7BZ11 118 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 FBP2O00757 339 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 TRAF3IP2O43734 574 aaPredicted RBP17.62■□□□□ 0.41
CKLF-201ENST00000264001 HPRP00739 348 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 C8BP07358 591 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 PCGF2P35227 344 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 SH3BGRP55822 239 aaPredicted RBP17.62■□□□□ 0.41
CKLF-201ENST00000264001 MS4A18Q3C1V0 323 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 SWT1Q5T5J6 900 aaKnown RBP17.62■□□□□ 0.41
CKLF-201ENST00000264001 DNM1P46Q6ZS02 220 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 UEVLDQ8IX04 471 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 MAGEE2Q8TD90 523 aaPredicted RBP17.62■□□□□ 0.41
CKLF-201ENST00000264001 SLC41A3Q96GZ6 507 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 ADAD1Q96M93 576 aaKnown RBP17.62■□□□□ 0.41
CKLF-201ENST00000264001 ZNF317Q96PQ6 595 aaPredicted RBP17.62■□□□□ 0.41
CKLF-201ENST00000264001 TMEM43Q9BTV4 400 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 REG4Q9BYZ8 158 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 NELFAQ9H3P2 528 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 MOKQ9UQ07 419 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 ZANQ9Y493 2812 aa17.62■□□□□ 0.41
CKLF-201ENST00000264001 ARPC4-TTLL3A0A0A6YYG9 625 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 IGHV1-18A0A0C4DH31 117 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 AKAP8O43823 692 aaKnown RBP17.61■□□□□ 0.41
CKLF-201ENST00000264001 FMO6PO60774 539 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 TROVE2P10155 538 aaKnown RBP eCLIP17.61■□□□□ 0.41
CKLF-201ENST00000264001 NQO1P15559 274 aaKnown RBP17.61■□□□□ 0.41
CKLF-201ENST00000264001 TUBA1BP68363 451 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 TUBA4AP68366 448 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 NPTX1Q15818 432 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 TRMT5Q32P41 509 aaKnown RBP17.61■□□□□ 0.41
CKLF-201ENST00000264001 ANKRD16Q6P6B7 361 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 ZNF613Q6PF04 617 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 TUBA1AQ71U36 451 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 PATL1Q86TB9 770 aaKnown RBP17.61■□□□□ 0.41
CKLF-201ENST00000264001 GPR137CQ8N3F9 429 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 SCAIQ8N9R8 606 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 ANKK1Q8NFD2 765 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 OR6T1Q8NGN1 323 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 MOGAT1Q96PD6 335 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 SLC38A2Q96QD8 506 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 OR2M2Q96R28 347 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 ASPNQ9BXN1 380 aa17.61■□□□□ 0.41
CKLF-201ENST00000264001 LRRN3E7EW58 273 aa17.6■□□□□ 0.41
CKLF-201ENST00000264001 SSX4O60224 188 aa17.6■□□□□ 0.41
CKLF-201ENST00000264001 CD247P20963 164 aa17.6■□□□□ 0.41
CKLF-201ENST00000264001 PAX7P23759 505 aa17.6■□□□□ 0.41
CKLF-201ENST00000264001 APOBEC3AP31941 199 aaPredicted RBP17.6■□□□□ 0.41
CKLF-201ENST00000264001 GZMMP51124 257 aa17.6■□□□□ 0.41
CKLF-201ENST00000264001 ARF1P84077 181 aaKnown RBP17.6■□□□□ 0.41
CKLF-201ENST00000264001 SF3A3Q12874 501 aaKnown RBP eCLIP17.6■□□□□ 0.41
CKLF-201ENST00000264001 CYLC2Q14093 348 aaPredicted RBP17.6■□□□□ 0.41
CKLF-201ENST00000264001 INTS11Q5TA45 600 aaKnown RBP17.6■□□□□ 0.41
CKLF-201ENST00000264001 NANOGP8Q6NSW7 305 aa17.6■□□□□ 0.41
CKLF-201ENST00000264001 RBM45Q8IUH3 476 aaKnown RBP17.6■□□□□ 0.41
CKLF-201ENST00000264001 TMEM123Q8N131 208 aa17.6■□□□□ 0.41
CKLF-201ENST00000264001 C10orf53Q8N6V4 93 aa17.6■□□□□ 0.41
CKLF-201ENST00000264001 PIK3C3Q8NEB9 887 aa17.6■□□□□ 0.41
CKLF-201ENST00000264001 OR4D11Q8NGI4 311 aa17.6■□□□□ 0.41
CKLF-201ENST00000264001 VANGL1Q8TAA9 524 aaPredicted RBP17.6■□□□□ 0.41
CKLF-201ENST00000264001 TAMM41Q96BW9 452 aa17.6■□□□□ 0.41
CKLF-201ENST00000264001 NANOGQ9H9S0 305 aa17.6■□□□□ 0.41
CKLF-201ENST00000264001 GPR35Q9HC97 309 aa17.6■□□□□ 0.41
CKLF-201ENST00000264001 FGFR1OP2Q9NVK5 253 aa17.6■□□□□ 0.41
CKLF-201ENST00000264001 MRPL39Q9NYK5 338 aaKnown RBP17.6■□□□□ 0.41
CKLF-201ENST00000264001 CPSF4LA6NMK7 179 aaKnown RBP17.59■□□□□ 0.41
CKLF-201ENST00000264001 CHP2O43745 196 aa17.59■□□□□ 0.41
CKLF-201ENST00000264001 HLA-DOBP13765 273 aa17.59■□□□□ 0.41
CKLF-201ENST00000264001 HOXB1P14653 301 aaPredicted RBP17.59■□□□□ 0.41
CKLF-201ENST00000264001 ARFIP2P53365 341 aa17.59■□□□□ 0.41
CKLF-201ENST00000264001 NUDT6P53370 316 aa17.59■□□□□ 0.41
CKLF-201ENST00000264001 POU3F1Q03052 451 aaPredicted RBP17.59■□□□□ 0.41
CKLF-201ENST00000264001 KRTAP1-1Q07627 177 aa17.59■□□□□ 0.41
CKLF-201ENST00000264001 PMS2P3Q13401 168 aa17.59■□□□□ 0.41
CKLF-201ENST00000264001 VMACQ2NL98 169 aa17.59■□□□□ 0.41
CKLF-201ENST00000264001 CEACAM16Q2WEN9 425 aa17.59■□□□□ 0.41
CKLF-201ENST00000264001 ENTPD8Q5MY95 495 aa17.59■□□□□ 0.41
CKLF-201ENST00000264001 CGB2Q6NT52 195 aa17.59■□□□□ 0.41
CKLF-201ENST00000264001 LINC00114Q6XXX2 140 aa17.59■□□□□ 0.41
CKLF-201ENST00000264001 SLC26A7Q8TE54 656 aa17.59■□□□□ 0.41
CKLF-201ENST00000264001 ZNF837Q96EG3 531 aaPredicted RBP17.59■□□□□ 0.41
CKLF-201ENST00000264001 KCNS3Q9BQ31 491 aa17.59■□□□□ 0.41
CKLF-201ENST00000264001 EMC6Q9BV81 110 aa17.59■□□□□ 0.41
CKLF-201ENST00000264001 CRLF2Q9HC73 371 aa17.59■□□□□ 0.41
CKLF-201ENST00000264001 CRNNQ9UBG3 495 aaPredicted RBP17.59■□□□□ 0.41
CKLF-201ENST00000264001 INAFM1C9JVW0 142 aa17.58■□□□□ 0.4
CKLF-201ENST00000264001 THY1P04216 161 aa17.58■□□□□ 0.4
CKLF-201ENST00000264001 PUDPQ08623 228 aa17.58■□□□□ 0.4
CKLF-201ENST00000264001 KLF10Q13118 480 aa17.58■□□□□ 0.4
CKLF-201ENST00000264001 RAB35Q15286 201 aa17.58■□□□□ 0.4
CKLF-201ENST00000264001 C3orf36Q3SXR2 165 aa17.58■□□□□ 0.4
CKLF-201ENST00000264001 MMEL1Q495T6 779 aa17.58■□□□□ 0.4
CKLF-201ENST00000264001 RABL3Q5HYI8 236 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms