RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 CMPK1P30085 196 aa11.34□□□□□ -0.59
CHMP2B-201ENST00000263780 PRSS3P35030 304 aa11.34□□□□□ -0.59
CHMP2B-201ENST00000263780 RFC3P40938 356 aa11.34□□□□□ -0.59
CHMP2B-201ENST00000263780 MEOX2P50222 304 aa11.34□□□□□ -0.59
CHMP2B-201ENST00000263780 GPR85P60893 370 aa11.34□□□□□ -0.59
CHMP2B-201ENST00000263780 SRSF4Q08170 494 aaKnown RBP11.34□□□□□ -0.59
CHMP2B-201ENST00000263780 ISXQ2M1V0 245 aa11.34□□□□□ -0.59
CHMP2B-201ENST00000263780 ENPP7Q6UWV6 458 aa11.34□□□□□ -0.59
CHMP2B-201ENST00000263780 DPY19L2P2Q6ZN68 376 aa11.34□□□□□ -0.59
CHMP2B-201ENST00000263780 CDRT4Q8N9R6 151 aa11.34□□□□□ -0.59
CHMP2B-201ENST00000263780 GRHL3Q8TE85 626 aa11.34□□□□□ -0.59
CHMP2B-201ENST00000263780 DUSP19Q8WTR2 217 aa11.34□□□□□ -0.59
CHMP2B-201ENST00000263780 HERVK_113Q902F9 699 aa11.34□□□□□ -0.59
CHMP2B-201ENST00000263780 PDCD10Q9BUL8 212 aa11.34□□□□□ -0.59
CHMP2B-201ENST00000263780 C19orf53Q9UNZ5 99 aaPredicted RBP11.34□□□□□ -0.59
CHMP2B-201ENST00000263780 TRAV14DV4A0A0A6YYC5 116 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 CENPVL1A0A0U1RR11 272 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 OR5H14A6NHG9 310 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 RAD1O60671 282 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 DNAJB6O75190 326 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 ITGB2P05107 769 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 AK4P27144 223 aaPredicted RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 PPIAP62937 165 aaKnown RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 NTHL1P78549 312 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 TNFRSF17Q02223 184 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 ALKBH1Q13686 389 aaKnown RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 SNTB1Q13884 538 aaKnown RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 JMJD6Q6NYC1 403 aaPredicted RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 STEAP1BQ6NZ63 245 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 ACOT7LQ6ZUV0 252 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 OR2W3Q7Z3T1 314 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 SCLYQ96I15 445 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF471Q9BX82 626 aaPredicted RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 XKR8Q9H6D3 395 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 C6orf106Q9H6K1 298 aaPredicted RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 FANCFQ9NPI8 374 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 SLC17A5Q9NRA2 495 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 APOBEC3BQ9UH17 382 aaKnown RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 ABT1Q9ULW3 272 aaKnown RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 TNFSF18Q9UNG2 199 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 MYO10Q9HD67 2058 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 KIAA1549LQ6ZVL6 1849 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 TRBV5-5A0A0J9YX44 114 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 TMEM272A0A1B0GTI8 110 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 A0A1B0GWA3 101 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 H0YC42 278 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 SULT1C2O00338 296 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 SRPX2O60687 465 aaPredicted RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 C8AP07357 584 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 OR4E1P0C645 316 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 SPI1P17947 270 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 LUMP51884 338 aaPredicted RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 UBE2MP61081 183 aaKnown RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 RPS15P62841 145 aaKnown RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 TOMM20Q15388 145 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 FAM74A1Q5RGS3 127 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 DHRS7BQ6IAN0 325 aaPredicted RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 LRRTM1Q86UE6 522 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 STEAP2Q8NFT2 490 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 OR51L1Q8NGJ5 315 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 OR1J4Q8NGS1 313 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 INSM2Q96T92 566 aaPredicted RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 VRK1Q99986 396 aaPredicted RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF426Q9BUY5 554 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 MKKSQ9NPJ1 570 aaPredicted RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 CTSFQ9UBX1 484 aa11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 MDC1Q14676 2089 aaKnown RBP11.33□□□□□ -0.6
CHMP2B-201ENST00000263780 TMEM82A0PJX8 343 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 TMEM200CA6NKL6 621 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 ARPC3O15145 178 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 GLCEO94923 617 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 RPL4P36578 427 aaKnown RBP11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 TAS2R19P59542 299 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 CDK3Q00526 305 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 SREBF2Q12772 1141 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 RPE65Q16518 533 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 C11orf87Q6NUJ2 197 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 USP53Q70EK8 1073 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 OR2L3Q8NG85 312 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 OR6K6Q8NGW6 343 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 RGP1Q92546 391 aaPredicted RBP11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 POFUT1Q9H488 388 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 TM7SF3Q9NS93 570 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 RXFP3Q9NSD7 469 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 YBX2Q9Y2T7 364 aaKnown RBP11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 PLEKHM1Q9Y4G2 1056 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 ENTPD2Q9Y5L3 495 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 UTRNP46939 3433 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 A0A087WV62 115 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 EDDM13A0A1B0GTR0 161 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 PEX12O00623 359 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 NRG2O14511 850 aaPredicted RBP11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 CDC40O60508 579 aaKnown RBP eCLIP11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 SNAPINO95295 136 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 NR0B1P51843 470 aaKnown RBP11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 METAP1P53582 386 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 NANOS3P60323 173 aaKnown RBP11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 UBE2IP63279 158 aaKnown RBP11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 VWA2Q5GFL6 755 aa11.32□□□□□ -0.6
CHMP2B-201ENST00000263780 ZNF684Q5T5D7 378 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms