RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 MED25Q71SY5 747 aa9.95□□□□□ -0.82
CD44-201ENST00000263398 KLHDC8BQ8IXV7 354 aa9.95□□□□□ -0.82
CD44-201ENST00000263398 PAQR8Q8TEZ7 354 aa9.95□□□□□ -0.82
CD44-201ENST00000263398 SLC35B4Q969S0 331 aa9.95□□□□□ -0.82
CD44-201ENST00000263398 ZNF566Q969W8 418 aa9.95□□□□□ -0.82
CD44-201ENST00000263398 TMEM59Q9BXS4 323 aa9.95□□□□□ -0.82
CD44-201ENST00000263398 KIR3DX1Q9H7L2 352 aa9.95□□□□□ -0.82
CD44-201ENST00000263398 GALNT9Q9HCQ5 603 aa9.95□□□□□ -0.82
CD44-201ENST00000263398 RPS10P5Q9NQ39 176 aa9.95□□□□□ -0.82
CD44-201ENST00000263398 MUTYHQ9UIF7 546 aa9.95□□□□□ -0.82
CD44-201ENST00000263398 ANKRD30BLA7E2S9 258 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 SNAPINO95295 136 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 IFNA17P01571 189 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 SBK2P0C263 348 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 TGFBR3Q03167 851 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 GPR176Q14439 515 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 EXOSC6Q5RKV6 272 aaKnown RBP9.94□□□□□ -0.82
CD44-201ENST00000263398 CYHR1Q6ZMK1 362 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 GPR155Q7Z3F1 870 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 TRAPPC6BQ86SZ2 158 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 NKAIN4Q8IVV8 208 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 RIMKLAQ8IXN7 391 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 SPPL3Q8TCT6 385 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 MS4A6EQ96DS6 147 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 STACQ99469 402 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 OBP2AQ9NY56 170 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 COPS3Q9UNS2 423 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 A0A1W2PS29 197 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 ZAR1LA6NP61 321 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 CD300LBA8K4G0 201 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 EPHA1P21709 976 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 PRKACBP22694 351 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 ALDH3B1P43353 468 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 IDH3GP51553 393 aaPredicted RBP9.94□□□□□ -0.82
CD44-201ENST00000263398 DPTQ07507 201 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 SLC14A1Q13336 389 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 PEA15Q15121 130 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 TMEM176BQ3YBM2 270 aaPredicted RBP9.94□□□□□ -0.82
CD44-201ENST00000263398 FOXB2Q5VYV0 432 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 ALKAL2Q6UX46 152 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 CREB3L2Q70SY1 520 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 KCNG3Q8TAE7 436 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 TEAD3Q99594 435 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 SEMA6CQ9H3T2 930 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 FBXL2Q9UKC9 423 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 BOLA1Q9Y3E2 137 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 MMACHCQ9Y4U1 282 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 TRBV5-4A0A0C4DH59 114 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 KRBOX1C9JBD0 128 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 I6L893 689 aaPredicted RBP9.94□□□□□ -0.82
CD44-201ENST00000263398 IRF2P14316 349 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 VEGFCP49767 419 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 BTG1P62324 171 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 RPL23AP62750 156 aaKnown RBP9.94□□□□□ -0.82
CD44-201ENST00000263398 C17orf67Q0P5P2 114 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 RAB31Q13636 194 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 DUSP6Q16828 381 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 OR4K15Q8NH41 348 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 RSC1A1Q92681 617 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 RSPRY1Q96DX4 576 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 CMSS1Q9BQ75 279 aaKnown RBP9.94□□□□□ -0.82
CD44-201ENST00000263398 NUDT22Q9BRQ3 303 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 ENKD1Q9H0I2 346 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 LYRM4Q9HD34 91 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 EMC3Q9P0I2 261 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 HMGN4O00479 90 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 GPR137BO60478 399 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 ACTL6BO94805 426 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 GLCEO94923 617 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 UTS2O95399 124 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 PAPLNO95428 1278 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 CHRNB1P11230 501 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 DDOSTP39656 456 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 DUSP5Q16690 384 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 MEP1BQ16820 701 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 C14orf28Q4W4Y0 310 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 BEX5Q5H9J7 111 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 STEAP1BQ6NZ63 245 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 FAM57BQ71RH2 274 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 ESX1Q8N693 406 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 DYNC2LI1Q8TCX1 351 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 EMC7Q9NPA0 242 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 SAGE1Q9NXZ1 904 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 LUZP4Q9P127 313 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 KIF25Q9UIL4 384 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 DAPP1Q9UN19 280 aa9.94□□□□□ -0.82
CD44-201ENST00000263398 TMED7-TICAM2A0A0A6YYA0 188 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 NSG1A0A0A6YYJ2 146 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 TNFRSF10CO14798 259 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 B3GALT4O96024 378 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 TK1P04183 234 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 THBS1P07996 1170 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 SLC9A3R2Q15599 337 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 DHRS4L2Q6PKH6 230 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 ZNF836Q6ZNA1 936 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 RABEPKQ7Z6M1 372 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 SVBPQ8N300 66 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 DNAAF1Q8NEP3 725 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 RAB3CQ96E17 227 aa9.93□□□□□ -0.82
CD44-201ENST00000263398 Q96M85 177 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms