RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 RAB36O95755 333 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 OPN1LWP04000 364 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 CLUP10909 449 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 CDKN2AP42771 156 aaKnown RBP20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 PUDPQ08623 228 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 TOMM20Q15388 145 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 MS4A18Q3C1V0 323 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 MESTQ5EB52 335 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 ARMC4Q5T2S8 1044 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 SYT6Q5T7P8 510 aaPredicted RBP20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 B3GNT6Q6ZMB0 384 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 YRDCQ86U90 279 aaKnown RBP20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 ADPRHL1Q8NDY3 354 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 ZPLD1Q8TCW7 415 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 SLC39A7Q92504 469 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 DTNBP1Q96EV8 351 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 FANCFQ9NPI8 374 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 TRAPPC4Q9Y296 219 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 B3GALT5Q9Y2C3 310 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 OR6C68A6NDL8 312 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 SLC22A31A6NKX4 558 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 H3BSA7 217 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 KLK10O43240 276 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 LCKP06239 509 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 AHCYP23526 432 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 GDF1P27539 372 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 DCKP27707 260 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 RAC1P63000 192 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 TLE3Q04726 772 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 KRR1Q13601 381 aaKnown RBP20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 KLHL12Q53G59 568 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 IGFL2Q6UWQ7 119 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 OR14L1PQ8NHC6 308 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 MIB2Q96AX9 1013 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 TEAD3Q99594 435 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 OR51V1Q9H2C8 321 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 TXNIPQ9H3M7 391 aa20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 ZNF703Q9H7S9 590 aaPredicted RBP20.56■□□□□ 0.88
SMARCB1-201ENST00000263121 CEACAM4O75871 244 aa20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 APOL3O95236 402 aa20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 PTHP01270 115 aa20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 CD46P15529 392 aa20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 ARG2P78540 354 aa20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 DBPQ10586 325 aaPredicted RBP20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 ACKR1Q16570 336 aa20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 LEG1Q6P5S2 330 aa20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 TMPPEQ6ZT21 453 aa20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 JAZF1Q86VZ6 243 aa20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 OR9Q1Q8NGQ5 310 aa20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 SNIP1Q8TAD8 396 aaKnown RBP20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 ZNF519Q8TB69 540 aa20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 SCMH1Q96GD3 660 aa20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 CRELD1Q96HD1 420 aa20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 MSRB2Q9Y3D2 182 aa20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 KCNMB2Q9Y691 235 aa20.55■□□□□ 0.88
SMARCB1-201ENST00000263121 A0A1W2PNV4 684 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 AKR7A3O95154 331 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 PMS2P2O95744 297 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 DIO1P49895 249 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 P2RY4P51582 365 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 OR2B6P58173 313 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 RPL27P61353 136 aaKnown RBP20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 ZNF239Q16600 458 aaKnown RBP20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 GALNTL5Q7Z4T8 443 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 ARIH2OSQ8N7S6 290 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 DGCR14Q96DF8 476 aaKnown RBP20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 C5orf34Q96MH7 638 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 HAO2Q9NYQ3 351 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 B4GALT7Q9UBV7 327 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 NPIPB13A6NJU9 1138 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 NPIPB4C9JG80 1138 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 J3QRE1 110 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 SERPINI2O75830 405 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 PLGP00747 810 aaPredicted RBP20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 GYPBP06028 91 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 SLC25A1P53007 311 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 B3GLCTQ6Y288 498 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 SHFQ7M4L6 423 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 EXD3Q8N9H8 876 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 OR4F15Q8NGB8 312 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 JAM3Q9BX67 310 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 TTTY12Q9BZ98 90 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 CLEC2DQ9UHP7 191 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 SSUH2Q9Y2M2 353 aa20.54■□□□□ 0.88
SMARCB1-201ENST00000263121 SULT2B1O00204 365 aa20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 TRAPPC6AO75865 159 aa20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 GLSO94925 669 aaPredicted RBP20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 IGHA1P01876 353 aa20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 HPNP05981 417 aa20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 HLA-DOBP13765 273 aa20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 PSMB9P28065 219 aa20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 GSTT1P30711 240 aa20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 RPS7P62081 194 aaKnown RBP20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 SLC35A1P78382 337 aa20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 HYAL4Q2M3T9 481 aa20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 WIPI1Q5MNZ9 446 aaPredicted RBP20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 ADCK1Q86TW2 530 aa20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 KDM8Q8N371 416 aa20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 TMEM99Q8N816 258 aa20.53■□□□□ 0.88
SMARCB1-201ENST00000263121 SNX18Q96RF0 628 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms