RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 XKR8Q9H6D3 395 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 APMAPQ9HDC9 416 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 MTFP1Q9UDX5 166 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 ETV7Q9Y603 341 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 A0A1W2PQ45 241 aaPredicted RBP13.72□□□□□ -0.21
XRCC1-201ENST00000262887 A0A1W2PQY0 241 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 PMS2P1A4D2B8 440 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 LRRC72A6NJI9 287 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 LYPD3O95274 346 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 CSF1P09603 554 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 ITGB8P26012 769 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 SLC6A6P31641 620 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 GAS6Q14393 721 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 MANEAQ5SRI9 462 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 JMJD6Q6NYC1 403 aaPredicted RBP13.72□□□□□ -0.21
XRCC1-201ENST00000262887 ZNF765Q7L2R6 523 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 ARMC10Q8N2F6 343 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 RAB42Q8N4Z0 105 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 C12orf45Q8N5I9 185 aaPredicted RBP13.72□□□□□ -0.21
XRCC1-201ENST00000262887 TCEAL3Q969E4 200 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 MRPL48Q96GC5 212 aaKnown RBP13.72□□□□□ -0.21
XRCC1-201ENST00000262887 SDF2Q99470 211 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 PRDM9Q9NQV7 894 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 C2orf42Q9NWW7 574 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 TAS2R8Q9NYW2 309 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 NCDNQ9UBB6 729 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 ZNF281Q9Y2X9 895 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 PSMD9O00233 223 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 SLC35G4P0C7Q5 338 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 PPIAP62937 165 aaKnown RBP13.72□□□□□ -0.21
XRCC1-201ENST00000262887 CEBPEQ15744 281 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 PAN3Q58A45 887 aaKnown RBP13.72□□□□□ -0.21
XRCC1-201ENST00000262887 SPAG16Q8N0X2 631 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 KCNRGQ8N5I3 272 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 OR51S1Q8NGJ8 323 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 OR2A1Q8NGT9 310 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 DUSP19Q8WTR2 217 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 EXO5Q9H790 373 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 FKRPQ9H9S5 495 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 TCF7L1Q9HCS4 588 aa13.72□□□□□ -0.21
XRCC1-201ENST00000262887 NPIPA5A0A0B4J1W7 369 aa13.71□□□□□ -0.21
XRCC1-201ENST00000262887 IDSB3KWA1 339 aa13.71□□□□□ -0.21
XRCC1-201ENST00000262887 NPIPA7E9PJI5 369 aa13.71□□□□□ -0.21
XRCC1-201ENST00000262887 NPIPA8P0DM63 369 aa13.71□□□□□ -0.21
XRCC1-201ENST00000262887 ZNF124Q15973 351 aa13.71□□□□□ -0.21
XRCC1-201ENST00000262887 DHRS7BQ6IAN0 325 aaPredicted RBP13.71□□□□□ -0.21
XRCC1-201ENST00000262887 SLC16A13Q7RTY0 426 aa13.71□□□□□ -0.21
XRCC1-201ENST00000262887 DND1Q8IYX4 353 aaKnown RBP13.71□□□□□ -0.21
XRCC1-201ENST00000262887 BEST3Q8N1M1 668 aa13.71□□□□□ -0.21
XRCC1-201ENST00000262887 PHYHIPLQ96FC7 376 aa13.71□□□□□ -0.21
XRCC1-201ENST00000262887 ZNF75AQ96N20 296 aa13.71□□□□□ -0.21
XRCC1-201ENST00000262887 ADAT1Q9BUB4 502 aaKnown RBP13.71□□□□□ -0.21
XRCC1-201ENST00000262887 CHST6Q9GZX3 395 aa13.71□□□□□ -0.21
XRCC1-201ENST00000262887 PCDHB10Q9UN67 800 aa13.71□□□□□ -0.21
XRCC1-201ENST00000262887 OR10H1Q9Y4A9 318 aa13.71□□□□□ -0.21
XRCC1-201ENST00000262887 PDE4DIPQ5VU43 2346 aa13.71□□□□□ -0.21
XRCC1-201ENST00000262887 ZNF806P0C7X5 589 aa13.71□□□□□ -0.22
XRCC1-201ENST00000262887 HIST1H1CP16403 213 aaKnown RBP13.71□□□□□ -0.22
XRCC1-201ENST00000262887 DPTQ07507 201 aa13.71□□□□□ -0.22
XRCC1-201ENST00000262887 OR1S2Q8NGQ3 325 aa13.71□□□□□ -0.22
XRCC1-201ENST00000262887 CMSS1Q9BQ75 279 aaKnown RBP13.71□□□□□ -0.22
XRCC1-201ENST00000262887 ZNF471Q9BX82 626 aaPredicted RBP13.71□□□□□ -0.22
XRCC1-201ENST00000262887 SLITRK2Q9H156 845 aa13.71□□□□□ -0.22
XRCC1-201ENST00000262887 TSPAN10Q9H1Z9 355 aaPredicted RBP13.71□□□□□ -0.22
XRCC1-201ENST00000262887 SDHAF3Q9NRP4 125 aa13.71□□□□□ -0.22
XRCC1-201ENST00000262887 ZNF230Q9UIE0 474 aaPredicted RBP13.71□□□□□ -0.22
XRCC1-201ENST00000262887 ICAM5Q9UMF0 924 aa13.71□□□□□ -0.22
XRCC1-201ENST00000262887 SLC22A7Q9Y694 548 aa13.71□□□□□ -0.22
XRCC1-201ENST00000262887 OR14I1A6ND48 311 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 PEX12O00623 359 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 BCL2L11O43521 198 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 ZFPL1O95159 310 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 DBIP07108 87 aaKnown RBP13.7□□□□□ -0.22
XRCC1-201ENST00000262887 SPP1P10451 314 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 NID1P14543 1247 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 AKR1C2P52895 323 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 AKR1C1Q04828 323 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 SNTB1Q13884 538 aaKnown RBP13.7□□□□□ -0.22
XRCC1-201ENST00000262887 LY6G6FQ5SQ64 297 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 METRNLQ641Q3 311 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 STAC2Q6ZMT1 411 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 NRROSQ86YC3 692 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 ZNF619Q8N2I2 560 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 OR2L13Q8N349 312 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 OR14A16Q8NHC5 309 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 GLYATL2Q8WU03 294 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 PTDSS2Q9BVG9 487 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 FAM117AQ9C073 453 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 SYNPO2LQ9H987 977 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 MRPS30Q9NP92 439 aaKnown RBP13.7□□□□□ -0.22
XRCC1-201ENST00000262887 GOLGA4Q13439 2230 aaKnown RBP13.7□□□□□ -0.22
XRCC1-201ENST00000262887 LRRK1Q38SD2 2015 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 OR6C68A6NDL8 312 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 XRCC3O43542 346 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 HTR3BO95264 441 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 AKAIN1P0CW23 69 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 GTF2F2P13984 249 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 ADCYAP1P18509 176 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 BDKRB2P30411 391 aa13.7□□□□□ -0.22
XRCC1-201ENST00000262887 KCNJ3P48549 501 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms