RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 NPIPA1Q9UND3 350 aa24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 MRPS18CQ9Y3D5 142 aaKnown RBP24.73■■□□□ 1.55
SMARCD3-201ENST00000262188 NPIPB7O75200 414 aa24.72■■□□□ 1.55
SMARCD3-201ENST00000262188 ALPLP05186 524 aa24.72■■□□□ 1.55
SMARCD3-201ENST00000262188 ZNF17P17021 662 aa24.72■■□□□ 1.55
SMARCD3-201ENST00000262188 C1orf140Q5VVS0 124 aa24.72■■□□□ 1.55
SMARCD3-201ENST00000262188 SLC25A36Q96CQ1 311 aa24.72■■□□□ 1.55
SMARCD3-201ENST00000262188 OR5B2Q96R09 309 aa24.72■■□□□ 1.55
SMARCD3-201ENST00000262188 SERINC1Q9NRX5 453 aa24.72■■□□□ 1.55
SMARCD3-201ENST00000262188 SEC14L5O43304 696 aa24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 PTGS2P35354 604 aa24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 GALK2Q01415 458 aa24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 C3AR1Q16581 482 aa24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 ZNF181Q2M3W8 571 aa24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 ZIK1Q3SY52 487 aaPredicted RBP24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 PRR30Q53SZ7 412 aaPredicted RBP24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 RSBN1Q5VWQ0 802 aaPredicted RBP24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 C1orf94Q6P1W5 598 aa24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 UQCC2Q9BRT2 126 aa24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 LDAHQ9H6V9 325 aa24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 SOX14O95416 240 aa24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 PPP5CP53041 499 aa24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 GLYR1Q49A26 553 aaPredicted RBP24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 SLC46A3Q7Z3Q1 461 aa24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 RNF113BQ8IZP6 322 aaKnown RBP24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 CISD2Q8N5K1 135 aaKnown RBP24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 OR13C2Q8NGS9 318 aa24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 SLC25A18Q9H1K4 315 aa24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 EXO5Q9H790 373 aa24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 SPRR3Q9UBC9 169 aa24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 CAB39Q9Y376 341 aaPredicted RBP24.71■■□□□ 1.55
SMARCD3-201ENST00000262188 POLR2IP36954 125 aaKnown RBP24.7■■□□□ 1.54
SMARCD3-201ENST00000262188 ALDH3A2P51648 485 aa24.7■■□□□ 1.54
SMARCD3-201ENST00000262188 SUCLG1P53597 346 aaKnown RBP24.7■■□□□ 1.54
SMARCD3-201ENST00000262188 FOXK2Q01167 660 aa24.7■■□□□ 1.54
SMARCD3-201ENST00000262188 MYBPHQ13203 477 aa24.7■■□□□ 1.54
SMARCD3-201ENST00000262188 KDM4DQ6B0I6 523 aa24.7■■□□□ 1.54
SMARCD3-201ENST00000262188 KLHL17Q6TDP4 642 aa24.7■■□□□ 1.54
SMARCD3-201ENST00000262188 SIAH3Q8IW03 269 aa24.7■■□□□ 1.54
SMARCD3-201ENST00000262188 TEX19Q8NA77 164 aa24.7■■□□□ 1.54
SMARCD3-201ENST00000262188 SGTBQ96EQ0 304 aa24.7■■□□□ 1.54
SMARCD3-201ENST00000262188 KLF4O43474 513 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 SAGP10523 405 aaPredicted RBP24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 KLK2P20151 261 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 CTBP2P56545 445 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 CLDN15P56746 228 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 DDIT4LQ96D03 193 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 RBM4BQ9BQ04 359 aaKnown RBP24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 RBM4Q9BWF3 364 aaKnown RBP24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 ACKR4Q9NPB9 350 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 IL20RAQ9UHF4 553 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 TRAV36DV7A0A075B6V5 113 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 TRAV27A0A087WT01 109 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 TRGV5A0A0B4J1U4 118 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 A0A0J9YW62 118 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 DLGAP1O14490 977 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 ZNF208O43345 1280 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 BMP7P18075 431 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 POU3F2P20265 443 aaPredicted RBP24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 IGFBP5P24593 272 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 ELK4P28324 431 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 SRYQ05066 204 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 ZNF74Q16587 644 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 RPUSD3Q6P087 351 aaKnown RBP24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 KRT84Q9NSB2 600 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 MGAT4BQ9UQ53 548 aa24.69■■□□□ 1.54
SMARCD3-201ENST00000262188 ARRDC5A6NEK1 342 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 TNFSF11O14788 317 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 CCNKO75909 580 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 SNAP29O95721 258 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 BGLAPP02818 100 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 ANXA8P13928 327 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 EPHA2P29317 976 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 RAC1P63000 192 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 OR7A5Q15622 319 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 PLXDC2Q6UX71 529 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 BTLAQ7Z6A9 289 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 GGNQ86UU5 652 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 KIF18BQ86Y91 864 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 OR51A7Q8NH64 312 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 NEIL3Q8TAT5 605 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 GNPDA2Q8TDQ7 276 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 STK35Q8TDR2 534 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 SLC19A3Q9BZV2 496 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 EGLN3Q9H6Z9 239 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 SVILO95425 2214 aa24.68■■□□□ 1.54
SMARCD3-201ENST00000262188 EFCAB9A8MZ26 197 aa24.67■■□□□ 1.54
SMARCD3-201ENST00000262188 AHSA1O95433 338 aa24.67■■□□□ 1.54
SMARCD3-201ENST00000262188 DGUOKQ16854 277 aa24.67■■□□□ 1.54
SMARCD3-201ENST00000262188 UBE2UQ5VVX9 321 aa24.67■■□□□ 1.54
SMARCD3-201ENST00000262188 ZNF544Q6NX49 715 aa24.67■■□□□ 1.54
SMARCD3-201ENST00000262188 Q6ZPB1 254 aaPredicted RBP24.67■■□□□ 1.54
SMARCD3-201ENST00000262188 DGCR6LQ9BY27 220 aa24.67■■□□□ 1.54
SMARCD3-201ENST00000262188 CACNA1BQ00975 2339 aa24.67■■□□□ 1.54
SMARCD3-201ENST00000262188 EIF1AYO14602 144 aaKnown RBP24.67■■□□□ 1.54
SMARCD3-201ENST00000262188 OR7A10O76100 309 aa24.67■■□□□ 1.54
SMARCD3-201ENST00000262188 LHX2P50458 406 aa24.67■■□□□ 1.54
SMARCD3-201ENST00000262188 UCK2Q9BZX2 261 aa24.67■■□□□ 1.54
SMARCD3-201ENST00000262188 ENKD1Q9H0I2 346 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms