RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 AADACL3Q5VUY0 350 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 JMJD6Q6NYC1 403 aaPredicted RBP12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 OR5AS1Q8N127 324 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 OR5M9Q8NGP3 310 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 MS4A6EQ96DS6 147 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 TRMT61AQ96FX7 289 aaKnown RBP12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 WDR76Q9H967 626 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 DAPP1Q9UN19 280 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 SLC17A4Q9Y2C5 497 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 AVPR2P30518 371 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 EDDM3AQ14507 147 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 OR4D9Q8NGE8 314 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 ZNF431Q8TF32 576 aaPredicted RBP12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 ITFG2Q969R8 447 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 SLC35A4Q96G79 324 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 MMP27Q9H306 513 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 GLIPR2Q9H4G4 154 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 DDX31Q9H8H2 851 aaKnown RBP12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 LUZP4Q9P127 313 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 MBD1Q9UIS9 605 aaPredicted RBP12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 CBR3O75828 277 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 IGLV3-27P01718 113 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 NPPBP16860 134 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 TGM4P49221 684 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 ZNF45Q02386 682 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 MEF2DQ14814 521 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 OR11G2Q8NGC1 345 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 CSF3RQ99062 836 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 UCKL1Q9NWZ5 548 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 SH2D7A6NKC9 451 aaPredicted RBP12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 HSPB6O14558 160 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 KIAA0513O60268 411 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 CD22P20273 847 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 CAPN3P20807 821 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 TAS2R46P59540 309 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 PFN3P60673 137 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 PCGF3Q3KNV8 242 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 ZNF628Q5EBL2 1059 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 VASH2Q86V25 355 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 OR6V1Q8N148 313 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 RBMXL3Q8N7X1 1067 aaKnown RBP12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 OR8J2Q8NGG1 315 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 TAMM41Q96BW9 452 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 SEMA4CQ9C0C4 833 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 LAT2Q9GZY6 243 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 DCAF13Q9NV06 445 aaKnown RBP12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 ATG4BQ9Y4P1 393 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 H7C1C5 153 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 OR7C1O76099 320 aaPredicted RBP12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 GYPBP06028 91 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 FABP1P07148 127 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 HNF1AP20823 631 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 BMXP51813 675 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 LCN6P62502 163 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 COMTD1Q86VU5 262 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 GRPEL2Q8TAA5 225 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 SYNPRQ8TBG9 265 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 NT5C3BQ969T7 300 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 HRASLS5Q96KN8 279 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 QRSL1Q9H0R6 528 aaKnown RBP12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 SLC25A18Q9H1K4 315 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 IL21Q9HBE4 155 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 KCNJ16Q9NPI9 418 aa12.51□□□□□ -0.41
PDGFRB-201ENST00000261799 M0QZ24 198 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 AGFG1P52594 562 aaKnown RBP12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 NXPH1P58417 271 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 UGT8Q16880 541 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 RGS7BPQ6MZT1 257 aaPredicted RBP12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 BEST3Q8N1M1 668 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 Q8N402 240 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 LYSMD1Q96S90 227 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 GFOD1Q9NXC2 390 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 FBXL4Q9UKA2 621 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 LSM5Q9Y4Y9 91 aaKnown RBP12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 DEGS1O15121 323 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 CEACAM5P06731 702 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 PTGS2P35354 604 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 SNCAP37840 140 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 ARL16Q0P5N6 197 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 GALEQ14376 348 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 TMEM102Q8N9M5 508 aaPredicted RBP12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 OR10X1Q8NGY0 326 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 POC1BQ8TC44 478 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 LIPHQ8WWY8 451 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 WBP2Q969T9 261 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 INTS12Q96CB8 462 aaKnown RBP12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 SGPP1Q9BX95 441 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 OSBPL7Q9BZF2 842 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 MRPL15Q9P015 296 aaKnown RBP12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 TMEM212A6NML5 194 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 CTSLP07711 333 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 ERP29P30040 261 aaKnown RBP12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 TMPRSS3P57727 454 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 HAGHLQ6PII5 290 aaPredicted RBP12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 NLRP8Q86W28 1048 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 MARVELD2Q8N4S9 558 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 DTX3Q8N9I9 347 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 TSLPQ969D9 159 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 MIB2Q96AX9 1013 aa12.5□□□□□ -0.41
PDGFRB-201ENST00000261799 GIMAP5Q96F15 307 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms