RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 CCDC120Q96HB5 630 aa12.79□□□□□ -0.36
CDH1-201ENST00000261769 NMNAT3Q96T66 252 aa12.79□□□□□ -0.36
CDH1-201ENST00000261769 A0A1W2PQF6 199 aa12.79□□□□□ -0.36
CDH1-201ENST00000261769 H7C1C5 153 aa12.79□□□□□ -0.36
CDH1-201ENST00000261769 ICOSLGO75144 302 aa12.79□□□□□ -0.36
CDH1-201ENST00000261769 NAGAP17050 411 aa12.79□□□□□ -0.36
CDH1-201ENST00000261769 PRPH2P23942 346 aa12.79□□□□□ -0.36
CDH1-201ENST00000261769 UCNP55089 124 aa12.79□□□□□ -0.36
CDH1-201ENST00000261769 LCN6P62502 163 aa12.79□□□□□ -0.36
CDH1-201ENST00000261769 FOXK2Q01167 660 aa12.79□□□□□ -0.36
CDH1-201ENST00000261769 ZNF91Q05481 1191 aa12.79□□□□□ -0.36
CDH1-201ENST00000261769 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.79□□□□□ -0.36
CDH1-201ENST00000261769 Q8N402 240 aa12.79□□□□□ -0.36
CDH1-201ENST00000261769 BOD1Q96IK1 185 aa12.79□□□□□ -0.36
CDH1-201ENST00000261769 COG8Q96MW5 612 aa12.79□□□□□ -0.36
CDH1-201ENST00000261769 ZDBF2Q9HCK1 2354 aa12.79□□□□□ -0.36
CDH1-201ENST00000261769 SORBS2O94875 1100 aaKnown RBP12.78□□□□□ -0.36
CDH1-201ENST00000261769 CD160O95971 181 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 EIF2S3P41091 472 aaKnown RBP12.78□□□□□ -0.36
CDH1-201ENST00000261769 GABRA2P47869 451 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 MYBPHQ13203 477 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 SQSTM1Q13501 440 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 ZNF628Q5EBL2 1059 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 TMEM72A0PK05 275 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 CXCL13O43927 109 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 DRD5P21918 477 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 STOMP27105 288 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 RHBDD2Q6NTF9 364 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 MAVSQ7Z434 540 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 SPERTQ8NA61 448 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 OR11G2Q8NGC1 345 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 MED18Q9BUE0 208 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 NELFAQ9H3P2 528 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 MYOTQ9UBF9 498 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 FBXL4Q9UKA2 621 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 KCNE1BA0A087WTH5 132 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 AGAP5A6NIR3 686 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 TMEM212A6NML5 194 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 CRYAAP02489 173 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 CDK1P06493 297 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 GRB2P62993 217 aaKnown RBP12.78□□□□□ -0.36
CDH1-201ENST00000261769 CRMP1Q14194 572 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 MPEG1Q2M385 716 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 SLC22A6Q4U2R8 563 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 SLC35D3Q5M8T2 416 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 NXNL2Q5VZ03 156 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 TBPL2Q6SJ96 375 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 ANKRD53Q8N9V6 530 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 TIMD4Q96H15 378 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 ZC3HAV1LQ96H79 300 aaKnown RBP12.78□□□□□ -0.36
CDH1-201ENST00000261769 LRRC3BQ96PB8 259 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 HINT2Q9BX68 163 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 VN1R1Q9GZP7 353 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 METTL9Q9H1A3 318 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 GHRLQ9UBU3 117 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 B3GALT5Q9Y2C3 310 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 HDGFL3Q9Y3E1 203 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 A0A0A6YYD5 115 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 SNAPC5O75971 98 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 ARSBP15848 533 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 ERVK-16P61578 105 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 ZNF517Q6ZMY9 492 aaPredicted RBP12.78□□□□□ -0.36
CDH1-201ENST00000261769 UTS2BQ765I0 119 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 DPY19L4Q7Z388 723 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 HMGCLL1Q8TB92 370 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 PSMF1Q92530 271 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 CNRIP1Q96F85 164 aaPredicted RBP12.78□□□□□ -0.36
CDH1-201ENST00000261769 ITGB1BP2Q9UKP3 347 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 ZNF281Q9Y2X9 895 aa12.78□□□□□ -0.36
CDH1-201ENST00000261769 INMT-MINDY4F8WBC2 141 aa12.77□□□□□ -0.36
CDH1-201ENST00000261769 UQCRC1P31930 480 aa12.77□□□□□ -0.36
CDH1-201ENST00000261769 HSF1Q00613 529 aa12.77□□□□□ -0.36
CDH1-201ENST00000261769 RAB12Q6IQ22 244 aa12.77□□□□□ -0.36
CDH1-201ENST00000261769 TMEM151AQ8N4L1 468 aa12.77□□□□□ -0.36
CDH1-201ENST00000261769 FUNDC2Q9BWH2 189 aa12.77□□□□□ -0.36
CDH1-201ENST00000261769 TSPAN10Q9H1Z9 355 aaPredicted RBP12.77□□□□□ -0.36
CDH1-201ENST00000261769 ENPP5Q9UJA9 477 aa12.77□□□□□ -0.36
CDH1-201ENST00000261769 AK6Q9Y3D8 172 aaKnown RBP12.77□□□□□ -0.36
CDH1-201ENST00000261769 BRWD1Q9NSI6 2320 aa12.77□□□□□ -0.36
CDH1-201ENST00000261769 EPOPA6NHQ4 379 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 OR8G3PP0DMU2 310 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 CLDN15P56746 228 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 ZNF766Q5HY98 468 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 FAM199XQ6PEV8 388 aaPredicted RBP12.77□□□□□ -0.37
CDH1-201ENST00000261769 OR5M1Q8NGP8 315 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 TEX37Q96LM6 180 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 UCK1Q9HA47 277 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 PRDM7Q9NQW5 492 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 REV1Q9UBZ9 1251 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 V9GY05 133 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 OTOL1A6NHN0 477 aaPredicted RBP12.77□□□□□ -0.37
CDH1-201ENST00000261769 SLC22A20A6NK97 555 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 GABRR1P24046 479 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 ZNF385BQ569K4 471 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 STPG1Q5TH74 334 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 ELMOD2Q8IZ81 293 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 TFAP2CQ92754 450 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 TCEAL3Q969E4 200 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 PPP1R14BQ96C90 147 aa12.77□□□□□ -0.37
CDH1-201ENST00000261769 LHX9Q9NQ69 397 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms