RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 RNF13O43567 381 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 DXOO77932 396 aaKnown RBP20.16■□□□□ 0.82
SIX3-201ENST00000260653 TFPIP10646 304 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 OR7A5Q15622 319 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 DYNC2LI1Q8TCX1 351 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 ADAMTS17Q8TE56 1095 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 SPRYD4Q8WW59 207 aaPredicted RBP20.16■□□□□ 0.82
SIX3-201ENST00000260653 SMPDL3BQ92485 455 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 TIMP4Q99727 224 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 ALG8Q9BVK2 526 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 TMEM185BQ9H7F4 350 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 ISG20L2Q9H9L3 353 aaKnown RBP20.16■□□□□ 0.82
SIX3-201ENST00000260653 PLPP3O14495 311 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 GPX5O75715 221 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 CPEP16870 476 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 RAB43Q86YS6 212 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 IL22RA1Q8N6P7 574 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 ZFP41Q8N8Y5 198 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 OR52N1Q8NH53 320 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 NKD1Q969G9 470 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 THOC3Q96J01 351 aaKnown RBP20.16■□□□□ 0.82
SIX3-201ENST00000260653 DCSTAMPQ9H295 470 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 INIPQ9NRY2 104 aa20.16■□□□□ 0.82
SIX3-201ENST00000260653 DAPL1A0PJW8 107 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 C19orf57Q0VDD7 668 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 PON3Q15166 354 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 ZNF322Q6U7Q0 402 aaPredicted RBP20.15■□□□□ 0.82
SIX3-201ENST00000260653 LYPD4Q6UWN0 246 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 OR6K6Q8NGW6 343 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 NTNG2Q96CW9 530 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 GNRHR2Q96P88 292 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 MRPL39Q9NYK5 338 aaKnown RBP20.15■□□□□ 0.82
SIX3-201ENST00000260653 LRRTM2O43300 516 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 OPN1LWP04000 364 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 NAA10P41227 235 aaPredicted RBP20.15■□□□□ 0.82
SIX3-201ENST00000260653 TIMM50Q3ZCQ8 353 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 GLYR1Q49A26 553 aaPredicted RBP20.15■□□□□ 0.82
SIX3-201ENST00000260653 EMC4Q5J8M3 183 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 GPR139Q6DWJ6 353 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 MFSD8Q8NHS3 518 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 TBC1D15Q8TC07 691 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 JSRP1Q96MG2 331 aaPredicted RBP20.15■□□□□ 0.82
SIX3-201ENST00000260653 B3GNT4Q9C0J1 378 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 WDR70Q9NW82 654 aa20.15■□□□□ 0.82
SIX3-201ENST00000260653 FAM171A2A8MVW0 826 aa20.14■□□□□ 0.82
SIX3-201ENST00000260653 FAM47E-STBD1D6RA91 191 aa20.14■□□□□ 0.82
SIX3-201ENST00000260653 TFP02787 698 aa20.14■□□□□ 0.82
SIX3-201ENST00000260653 HCCSP53701 268 aa20.14■□□□□ 0.82
SIX3-201ENST00000260653 ROR2Q01974 943 aaKnown RBP20.14■□□□□ 0.82
SIX3-201ENST00000260653 LGALS3BPQ08380 585 aa20.14■□□□□ 0.82
SIX3-201ENST00000260653 POU4F2Q12837 409 aa20.14■□□□□ 0.82
SIX3-201ENST00000260653 GGTLC2Q14390 218 aa20.14■□□□□ 0.82
SIX3-201ENST00000260653 BEST3Q8N1M1 668 aa20.14■□□□□ 0.82
SIX3-201ENST00000260653 KDM8Q8N371 416 aa20.14■□□□□ 0.82
SIX3-201ENST00000260653 RFLNBQ8N5W9 214 aa20.14■□□□□ 0.82
SIX3-201ENST00000260653 OR6S1Q8NH40 331 aa20.14■□□□□ 0.82
SIX3-201ENST00000260653 SGCZQ96LD1 299 aa20.14■□□□□ 0.82
SIX3-201ENST00000260653 TIMMDC1Q9NPL8 285 aa20.14■□□□□ 0.82
SIX3-201ENST00000260653 CAB39Q9Y376 341 aaPredicted RBP20.14■□□□□ 0.82
SIX3-201ENST00000260653 SNPHO15079 494 aa20.14■□□□□ 0.81
SIX3-201ENST00000260653 OR6A2O95222 327 aa20.14■□□□□ 0.81
SIX3-201ENST00000260653 PYCR1P32322 319 aa20.14■□□□□ 0.81
SIX3-201ENST00000260653 DIO1P49895 249 aa20.14■□□□□ 0.81
SIX3-201ENST00000260653 GALEQ14376 348 aa20.14■□□□□ 0.81
SIX3-201ENST00000260653 ACKR1Q16570 336 aa20.14■□□□□ 0.81
SIX3-201ENST00000260653 LCN1P1Q5VSP4 162 aa20.14■□□□□ 0.81
SIX3-201ENST00000260653 C3orf33Q6P1S2 294 aa20.14■□□□□ 0.81
SIX3-201ENST00000260653 TMPRSS12Q86WS5 348 aa20.14■□□□□ 0.81
SIX3-201ENST00000260653 TRMT61AQ96FX7 289 aaKnown RBP20.14■□□□□ 0.81
SIX3-201ENST00000260653 UBL7Q96S82 380 aaPredicted RBP20.14■□□□□ 0.81
SIX3-201ENST00000260653 CNN2Q99439 309 aaKnown RBP20.14■□□□□ 0.81
SIX3-201ENST00000260653 EXOSC4Q9NPD3 245 aaKnown RBP20.14■□□□□ 0.81
SIX3-201ENST00000260653 RPH3AQ9Y2J0 694 aaPredicted RBP20.14■□□□□ 0.81
SIX3-201ENST00000260653 CEP250Q9BV73 2442 aa20.14■□□□□ 0.81
SIX3-201ENST00000260653 MED13Q9UHV7 2174 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 A0A1W2PQL4 384 aaPredicted RBP20.13■□□□□ 0.81
SIX3-201ENST00000260653 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.13■□□□□ 0.81
SIX3-201ENST00000260653 DCTN6O00399 190 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 CLPXO76031 633 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 PSMA1P25786 263 aaKnown RBP20.13■□□□□ 0.81
SIX3-201ENST00000260653 IDUAP35475 653 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 CRYBB2P43320 205 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 MAP2K6P52564 334 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 EXD3Q8N9H8 876 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 TMEM203Q969S6 136 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 ISYNA1Q9NPH2 558 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 INPP5EQ9NRR6 644 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 SERINC1Q9NRX5 453 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 A0A0G2JMM0 328 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 A0A1W2PPB8 328 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 A0A1W2PRS3 328 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 KIR3DP1A8MWS1 328 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 ARHGEF9O43307 516 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 LIFP15018 202 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 GTF2E2P29084 291 aaKnown RBP20.13■□□□□ 0.81
SIX3-201ENST00000260653 ZNF85Q03923 595 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 MYBPHQ13203 477 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 TPBGQ13641 420 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 TGIF1Q15583 401 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 LINC01590Q5TEZ4 76 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms