RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 SYNPRQ8TBG9 265 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 ZNF436Q9C0F3 470 aaPredicted RBP13.9□□□□□ -0.18
DDX56-201ENST00000258772 OR5V1Q9UGF6 321 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 HIF3AQ9Y2N7 669 aa13.9□□□□□ -0.18
DDX56-201ENST00000258772 TMEM72A0PK05 275 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 NAP1L6A6NFF2 107 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 CRYZL1O95825 349 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 TGM6O95932 706 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 CD14P08571 375 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 TACSTD2P09758 323 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 MAOAP21397 527 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 SLC25A1P53007 311 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 AP3S2P59780 193 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 ARPC4P59998 168 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 WBP2NLQ6ICG8 309 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 SEZ6L2Q6UXD5 910 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 JAZF1Q86VZ6 243 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 EID2Q8N6I1 236 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 ZNF615Q8N8J6 731 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 EXD3Q8N9H8 876 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 LRRC75AQ8NAA5 344 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 GATSQ8NAP1 163 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 FCAMRQ8WWV6 532 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 NXPE2Q96DL1 559 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 MOGAT1Q96PD6 335 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 CCNL2Q96S94 520 aaPredicted RBP13.89□□□□□ -0.19
DDX56-201ENST00000258772 FOXJ3Q9UPW0 622 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 TCRBV21S2A2A0A5A6 115 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 BLACEA4D250 179 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 PRAMEF26H0Y7S4 382 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 PRKNO60260 465 aaPredicted RBP13.89□□□□□ -0.19
DDX56-201ENST00000258772 SRPX2O60687 465 aaPredicted RBP13.89□□□□□ -0.19
DDX56-201ENST00000258772 PRAF2O60831 178 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 UPK3AO75631 287 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 OR8G3PP0DMU2 310 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 CALCBP10092 127 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 GABRG2P18507 467 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 DRD1P21728 446 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 NUDT1P36639 197 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 SELENOPP49908 381 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 ZNF81P51508 661 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 CTXN1P60606 82 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 SKP1P63208 163 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 ZNF74Q16587 644 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 Q499Y3 187 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 ELFN2Q5R3F8 820 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 LIPNQ5VXI9 398 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 APOOLQ6UXV4 268 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 C10orf53Q8N6V4 93 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 LIPHQ8WWY8 451 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 ADAD1Q96M93 576 aaKnown RBP13.89□□□□□ -0.19
DDX56-201ENST00000258772 ZNF578Q96N58 590 aaPredicted RBP13.89□□□□□ -0.19
DDX56-201ENST00000258772 LMF1Q96S06 567 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 MRI1Q9BV20 369 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 DPCDQ9BVM2 203 aaPredicted RBP13.89□□□□□ -0.19
DDX56-201ENST00000258772 OR10A4Q9H209 315 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 METTL17Q9H7H0 456 aaPredicted RBP13.89□□□□□ -0.19
DDX56-201ENST00000258772 EIF3KQ9UBQ5 218 aaKnown RBP13.89□□□□□ -0.19
DDX56-201ENST00000258772 MRM2Q9UI43 246 aaKnown RBP13.89□□□□□ -0.19
DDX56-201ENST00000258772 MOKQ9UQ07 419 aa13.89□□□□□ -0.19
DDX56-201ENST00000258772 CACNA1IQ9P0X4 2223 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 IGF2P01344 180 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 IGHV4-34P06331 123 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 RAB40ALP0C0E4 278 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 PNMTP11086 282 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 CTSEP14091 401 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 SSTR2P30874 369 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 VEGFCP49767 419 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 ALKBH1Q13686 389 aaKnown RBP13.88□□□□□ -0.19
DDX56-201ENST00000258772 Q6ZTK2 550 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 NLRC3Q7RTR2 1065 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 ATG4DQ86TL0 474 aaPredicted RBP13.88□□□□□ -0.19
DDX56-201ENST00000258772 CCDC28AQ8IWP9 274 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 ZSCAN1Q8NBB4 408 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 FAM71CQ8NEG0 241 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 OR2T35Q8NGX2 323 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 OR5AK2Q8NH90 309 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 C1orf216Q8TAB5 229 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 RAB40AQ8WXH6 277 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 HAVCR1Q96D42 359 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 RADILQ96JH8 1075 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 S1PR5Q9H228 398 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 TCF7L1Q9HCS4 588 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 SRA1Q9HD15 236 aaKnown RBP13.88□□□□□ -0.19
DDX56-201ENST00000258772 FRRS1LQ9P0K9 344 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 KLHDC2Q9Y2U9 406 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 PIAS3Q9Y6X2 628 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 CACNA1CQ13936 2221 aa13.88□□□□□ -0.19
DDX56-201ENST00000258772 SPTY2D1-AS1A0A0U1RR47 76 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 G3V3Q6 166 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 KHDRBS3O75525 346 aaKnown RBP13.87□□□□□ -0.19
DDX56-201ENST00000258772 IFNA16P05015 189 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 APEHP13798 732 aaKnown RBP13.87□□□□□ -0.19
DDX56-201ENST00000258772 CD226Q15762 336 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 ALG10Q5BKT4 473 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 TMEM69Q5SWH9 247 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 METTL11BQ5VVY1 283 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 RFPL4BQ6ZWI9 263 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 MED25Q71SY5 747 aa13.87□□□□□ -0.19
DDX56-201ENST00000258772 FAM220AQ7Z4H9 259 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms