RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 SHISA6Q6ZSJ9 500 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 TTLL10Q6ZVT0 673 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 NDUFAF7Q7L592 441 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 MCATQ8IVS2 390 aaKnown RBP4.35□□□□□ -1.71
USP44-201ENST00000258499 SLC35F3Q8IY50 421 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 SLC38A6Q8IZM9 456 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 BEST3Q8N1M1 668 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 KDM8Q8N371 416 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 PLPP7Q8NBV4 271 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 TMEM52Q8NDY8 209 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 OR10H5Q8NGA6 315 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 OR11H4Q8NGC9 324 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 GPR148Q8TDV2 347 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 SLC37A2Q8TED4 501 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 RLN3Q8WXF3 142 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 ZC3HAV1LQ96H79 300 aaKnown RBP4.35□□□□□ -1.71
USP44-201ENST00000258499 OR2A5Q96R48 311 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 MFFQ9GZY8 342 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 SLC17A4Q9Y2C5 497 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 SLC6A5Q9Y345 797 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 ZNF337Q9Y3M9 751 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 PLXNA3P51805 1871 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 OR6C68A6NDL8 312 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 SERINC4A6NH21 518 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 LEUTXA8MZ59 168 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 C17orf105B2RV13 164 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 B8ZZF3 427 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 HRKO00198 91 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 GPRIN2O60269 458 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 BRINP1O60477 761 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 PRAMEF2O60811 474 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 PRAF2O60831 178 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 GPANK1O95872 356 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 EGFP01133 1207 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 ANKRD34CP0C6C1 535 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 ERGP11308 486 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 ST6GAL1P15907 406 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 PBX2P40425 430 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 OR1D4P47884 311 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 DLX5P56178 289 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 FXYD6P3P58550 94 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 PRPS1P60891 318 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 TNK1Q13470 666 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 CBFBQ13951 182 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 LINC00303Q3SY05 128 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 TMEM196Q5HYL7 178 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 LRRC69Q6ZNQ3 347 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 Q6ZTK2 550 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 TMPRSS11FQ6ZWK6 438 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 NLRC3Q7RTR2 1065 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 TMPRSS9Q7Z410 1059 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 CD163Q86VB7 1156 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 FOXRED2Q8IWF2 684 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 SMIM4Q8WVI0 70 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 GIMAP5Q96F15 307 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 SEC22AQ96IW7 307 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 MYADMQ96S97 322 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 GPER1Q99527 375 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 PRSS27Q9BQR3 290 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 C7orf50Q9BRJ6 194 aaKnown RBP4.35□□□□□ -1.71
USP44-201ENST00000258499 SEC61A2Q9H9S3 476 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 ELOVL3Q9HB03 270 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 TMEM74BQ9NUR3 256 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 TAS2R3Q9NYW6 316 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 FLRT3Q9NZU0 649 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 DHDHQ9UQ10 334 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 SCN5AQ14524 2016 aa4.35□□□□□ -1.71
USP44-201ENST00000258499 OR2AT4A6NND4 320 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 F5H5P2 479 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 M0QYG6 137 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 LGALS8O00214 317 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 SLC16A7O60669 478 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 SDC3O75056 442 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 RAB3DO95716 219 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 TPOP07202 933 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 THEGLP0DJG4 465 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 DIO1P49895 249 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 MMP15P51511 669 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 GAS1P54826 345 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 GUCA2AQ02747 115 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 SPOCK1Q08629 439 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 RAB11BQ15907 218 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 CLPPQ16740 277 aaPredicted RBP4.34□□□□□ -1.71
USP44-201ENST00000258499 Q499Y3 187 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 CDNFQ49AH0 187 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 SMUG1Q53HV7 270 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 TMEM240Q5SV17 173 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 NHLRC1Q6VVB1 395 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 MED25Q71SY5 747 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 ZNF101Q8IZC7 436 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 FAM181AQ8N9Y4 354 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 OR13H1Q8NG92 308 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 OR51S1Q8NGJ8 323 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 LMX1AQ8TE12 382 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 CCDC107Q8WV48 283 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 FGF14Q92915 247 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 KLHL15Q96M94 604 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 INTS14Q96SY0 518 aa4.34□□□□□ -1.71
USP44-201ENST00000258499 SLC6A7Q99884 636 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms