RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 ZNF26P17031 533 aaPredicted RBP17.51■□□□□ 0.39
PTPRE-201ENST00000254667 HLA-DMAP28067 261 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 ALDH3B2P48448 385 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 P2RX1P51575 399 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 C6orf15Q6UXA7 325 aaPredicted RBP17.51■□□□□ 0.39
PTPRE-201ENST00000254667 MVB12AQ96EY5 273 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 OR52A5Q9H2C5 316 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 TRIM64BA6NI03 449 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 H0YIG0 161 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 FZD7O75084 574 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 NID1P14543 1247 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 YIF1BQ5BJH7 314 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 PGAP1Q75T13 922 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 DPY19L4Q7Z388 723 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 ACBD4Q8NC06 268 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 IP6K3Q96PC2 410 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 OR2M2Q96R28 347 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 TMEM59Q9BXS4 323 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 MFFQ9GZY8 342 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 GLTPQ9NZD2 209 aa17.51■□□□□ 0.39
PTPRE-201ENST00000254667 LGI1O95970 557 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 APOC3P02656 99 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 GABREP78334 506 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 KDM4DQ6B0I6 523 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 MTFR2Q6P444 385 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 WDR88Q6ZMY6 472 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 LINC00696Q6ZRV3 163 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 H1FNTQ75WM6 255 aaPredicted RBP17.5■□□□□ 0.39
PTPRE-201ENST00000254667 MRGPRX1Q96LB2 322 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 TEX37Q96LM6 180 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 GMPR2Q9P2T1 348 aaKnown RBP17.5■□□□□ 0.39
PTPRE-201ENST00000254667 MEIS3P1A6NDR6 274 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 H0Y8X5 98 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 CYB5BO43169 146 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 RFPL3O75679 317 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 SLC34A2O95436 690 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 FCGR2AP12318 317 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 GIFP27352 417 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 POLR2IP36954 125 aaKnown RBP17.5■□□□□ 0.39
PTPRE-201ENST00000254667 DUSP5Q16690 384 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 C9orf135Q5VTT2 229 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 BPIFB2Q8N4F0 458 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 RLIMQ9NVW2 624 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 MUTYHQ9UIF7 546 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 KRBA1A5PL33 1030 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 MSMO1Q15800 293 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 NOXA1Q86UR1 476 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 KIAA1958Q8N8K9 716 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 ABHD4Q8TB40 342 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 IL1F10Q8WWZ1 152 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 ZNF681Q96N22 645 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 UBQLN3Q9H347 655 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 EHFQ9NZC4 300 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 TMEM221A6NGB7 291 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 FZD6O60353 706 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 GLCEO94923 617 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 HTR2BP41595 481 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 NR4A2P43354 598 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 RPS25P62851 125 aaKnown RBP17.5■□□□□ 0.39
PTPRE-201ENST00000254667 PRICKLE2Q7Z3G6 844 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 SLC46A3Q7Z3Q1 461 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 OR13C9Q8NGT0 318 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 NIPSNAP1Q9BPW8 284 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 SLC25A31Q9H0C2 315 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 SDHAF2Q9NX18 166 aa17.5■□□□□ 0.39
PTPRE-201ENST00000254667 A0A1W2PPC4 97 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 GAB1Q13480 694 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 NHSL2Q5HYW2 709 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 WDSUB1Q8N9V3 476 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 OR56B2PQ8NGI1 322 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 GOT1L1Q8NHS2 421 aaPredicted RBP17.49■□□□□ 0.39
PTPRE-201ENST00000254667 TMEM106AQ96A25 262 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 TNRC6CQ9HCJ0 1690 aaKnown RBP17.49■□□□□ 0.39
PTPRE-201ENST00000254667 A0A1W2PR48 441 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 ACOD1A6NK06 481 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 RRP8O43159 456 aaKnown RBP17.49■□□□□ 0.39
PTPRE-201ENST00000254667 MT-ND4P03905 459 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 MAKP20794 623 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 ALKBH1Q13686 389 aaKnown RBP17.49■□□□□ 0.39
PTPRE-201ENST00000254667 ZADH2Q8N4Q0 377 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 NPFFR2Q9Y5X5 522 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 ETV7Q9Y603 341 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 TAF1P21675 1872 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 MCRIP1C9JLW8 97 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 CD22P20273 847 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 FGFBP1Q14512 234 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 KMT5CQ86Y97 462 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 CDCP1Q9H5V8 836 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 SH3BGRL2Q9UJC5 107 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 MEIOCA2RUB1 952 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 GRB2P62993 217 aaKnown RBP17.49■□□□□ 0.39
PTPRE-201ENST00000254667 SPEM1Q8N4L4 309 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 OR13F1Q8NGS4 319 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 IFI44Q8TCB0 444 aa17.49■□□□□ 0.39
PTPRE-201ENST00000254667 ZNF845Q96IR2 970 aaPredicted RBP17.49■□□□□ 0.39
PTPRE-201ENST00000254667 ZNF14P17017 642 aaPredicted RBP17.48■□□□□ 0.39
PTPRE-201ENST00000254667 SLC22A24Q8N4F4 322 aa17.48■□□□□ 0.39
PTPRE-201ENST00000254667 NKAIN3Q8N8D7 197 aa17.48■□□□□ 0.39
PTPRE-201ENST00000254667 DRAXINQ8NBI3 349 aaPredicted RBP17.48■□□□□ 0.39
PTPRE-201ENST00000254667 MIB2Q96AX9 1013 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms