RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 C16orf58Q96GQ5 468 aa18.74■□□□□ 0.59
RARA-201ENST00000254066 TRMT61BQ9BVS5 477 aaKnown RBP18.74■□□□□ 0.59
RARA-201ENST00000254066 MIOXQ9UGB7 285 aa18.74■□□□□ 0.59
RARA-201ENST00000254066 PLEKHA6Q9Y2H5 1048 aa18.74■□□□□ 0.59
RARA-201ENST00000254066 OR10H1Q9Y4A9 318 aa18.74■□□□□ 0.59
RARA-201ENST00000254066 COLCA2A8K830 154 aa18.74■□□□□ 0.59
RARA-201ENST00000254066 WASH3PC4AMC7 463 aa18.74■□□□□ 0.59
RARA-201ENST00000254066 TEAD2Q15562 447 aa18.74■□□□□ 0.59
RARA-201ENST00000254066 NDUFAF7Q7L592 441 aa18.74■□□□□ 0.59
RARA-201ENST00000254066 TAS1R1Q7RTX1 841 aa18.74■□□□□ 0.59
RARA-201ENST00000254066 UBE3DQ7Z6J8 389 aa18.74■□□□□ 0.59
RARA-201ENST00000254066 LMNTD1Q8N9Z9 388 aa18.74■□□□□ 0.59
RARA-201ENST00000254066 SMAD5Q99717 465 aaKnown RBP18.74■□□□□ 0.59
RARA-201ENST00000254066 SLC25A21Q9BQT8 299 aaPredicted RBP18.74■□□□□ 0.59
RARA-201ENST00000254066 ADAT1Q9BUB4 502 aaKnown RBP18.74■□□□□ 0.59
RARA-201ENST00000254066 MTHFD2LQ9H903 347 aaPredicted RBP18.74■□□□□ 0.59
RARA-201ENST00000254066 MMP26Q9NRE1 261 aa18.74■□□□□ 0.59
RARA-201ENST00000254066 CLDND1Q9NY35 253 aa18.74■□□□□ 0.59
RARA-201ENST00000254066 METTL1Q9UBP6 276 aaKnown RBP18.74■□□□□ 0.59
RARA-201ENST00000254066 COL4A3Q01955 1670 aa18.74■□□□□ 0.59
RARA-201ENST00000254066 LOC390937A0A1W2PQ73 354 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 PTHLHP12272 177 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 ZFP82Q8N141 532 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 GTPBP8Q8N3Z3 284 aaPredicted RBP18.73■□□□□ 0.59
RARA-201ENST00000254066 DUSP19Q8WTR2 217 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 CNN2Q99439 309 aaKnown RBP18.73■□□□□ 0.59
RARA-201ENST00000254066 PDCD1LG2Q9BQ51 273 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 DPEP2Q9H4A9 486 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 SLC22A7Q9Y694 548 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 FBP1P09467 338 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 OR4E1P0C645 316 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 ITPKBP27987 946 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 PNLIPRP2P54317 469 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 FAM46CQ5VWP2 391 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 ARHGAP11AQ6P4F7 1023 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 TMEM71Q6P5X7 295 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 THSD4Q6ZMP0 1018 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 OR51S1Q8NGJ8 323 aa18.73■□□□□ 0.59
RARA-201ENST00000254066 DUXAA6NLW8 204 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 AGR2O95994 175 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 ACTL6AO96019 429 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 CLUP10909 449 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 HLA-GP17693 338 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 CTSOP43234 321 aaPredicted RBP18.72■□□□□ 0.59
RARA-201ENST00000254066 ZNF136P52737 540 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 RPS15P62841 145 aaKnown RBP18.72■□□□□ 0.59
RARA-201ENST00000254066 NAAAQ02083 359 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 AGERQ15109 404 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 EIF2S3LQ2VIR3 472 aaKnown RBP18.72■□□□□ 0.59
RARA-201ENST00000254066 LRRTM4Q86VH4 590 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 PARGQ86W56 976 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 TDHQ8IZJ6 230 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 STEAP2Q8NFT2 490 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 RNF141Q8WVD5 230 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 LRIG1Q96JA1 1093 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 SLC25A18Q9H1K4 315 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 SFXN1Q9H9B4 322 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 UQCC1Q9NVA1 299 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 LSM7Q9UK45 103 aaKnown RBP18.72■□□□□ 0.59
RARA-201ENST00000254066 GXYLT2A0PJZ3 443 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 TMEM200CA6NKL6 621 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 DLSTP36957 453 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 ADH7P40394 386 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 CLDN12P56749 244 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 ARHGAP19Q14CB8 494 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 SLC35F2Q8IXU6 374 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 OR2L13Q8N349 312 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 NUP43Q8NFH3 380 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 TMEM41AQ96HV5 264 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 ZNF285Q96NJ3 590 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 TEX101Q9BY14 249 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 PCBD2Q9H0N5 130 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 SMCO4Q9NRQ5 59 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 LRFN2Q9ULH4 789 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 CLEC4EQ9ULY5 219 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 ZNF337Q9Y3M9 751 aa18.72■□□□□ 0.59
RARA-201ENST00000254066 A0A1W2PQ45 241 aaPredicted RBP18.71■□□□□ 0.59
RARA-201ENST00000254066 A0A1W2PQY0 241 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 GGT3PA6NGU5 568 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 INPP5JQ15735 1006 aaPredicted RBP18.71■□□□□ 0.59
RARA-201ENST00000254066 TPGS2Q68CL5 300 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 SLC35F3Q8IY50 421 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 LMLNQ96KR4 655 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 ACTRT3Q9BYD9 372 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 SLC25A13Q9UJS0 675 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 GNG8Q9UK08 70 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 EFCAB7A8K855 629 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 LILRB5O75023 590 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 THBS1P07996 1170 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 ERGP11308 486 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 GTF2F2P13984 249 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 NDUFS1P28331 727 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 CASRP41180 1078 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 C9orf64Q5T6V5 341 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 PRSS55Q6UWB4 352 aaPredicted RBP18.71■□□□□ 0.59
RARA-201ENST00000254066 RBMS3Q6XE24 437 aaKnown RBP18.71■□□□□ 0.59
RARA-201ENST00000254066 STAC2Q6ZMT1 411 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 NRSN1Q8IZ57 195 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 ZNF561Q8N587 486 aa18.71■□□□□ 0.59
RARA-201ENST00000254066 RFLNBQ8N5W9 214 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms