RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 FOXD4Q12950 439 aaPredicted RBP20.12■□□□□ 0.81
LSM4-201ENST00000252816 PMS2P3Q13401 168 aa20.12■□□□□ 0.81
LSM4-201ENST00000252816 ZNF672Q499Z4 452 aaPredicted RBP20.12■□□□□ 0.81
LSM4-201ENST00000252816 HIKESHIQ53FT3 197 aa20.12■□□□□ 0.81
LSM4-201ENST00000252816 HACD2Q6Y1H2 254 aa20.12■□□□□ 0.81
LSM4-201ENST00000252816 ABHD12BQ7Z5M8 362 aaPredicted RBP20.12■□□□□ 0.81
LSM4-201ENST00000252816 C17orf78Q8N4C9 275 aa20.12■□□□□ 0.81
LSM4-201ENST00000252816 HOPXQ9BPY8 73 aaPredicted RBP20.12■□□□□ 0.81
LSM4-201ENST00000252816 NSRP1Q9H0G5 558 aaKnown RBP20.12■□□□□ 0.81
LSM4-201ENST00000252816 ALPK2Q86TB3 2170 aa20.12■□□□□ 0.81
LSM4-201ENST00000252816 FLNAP21333 2647 aaKnown RBP20.12■□□□□ 0.81
LSM4-201ENST00000252816 OR6C65A6NJZ3 312 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 SHISA9B4DS77 424 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 PLPP3O14495 311 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 ABCD4O14678 606 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 MT-ATP6P00846 226 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 GNGT1P63211 74 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 ZNF74Q16587 644 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 TTC33Q6PID6 262 aaPredicted RBP20.11■□□□□ 0.81
LSM4-201ENST00000252816 DEF8Q6ZN54 512 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 CPLX4Q7Z7G2 160 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 WDFY1Q8IWB7 410 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 UEVLDQ8IX04 471 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 TMEM123Q8N131 208 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 LRRC75A-AS1Q8N1F1 130 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 BOD1Q96IK1 185 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 MPP4Q96JB8 637 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 OR2M2Q96R28 347 aa20.11■□□□□ 0.81
LSM4-201ENST00000252816 USF3Q68DE3 2245 aa20.1■□□□□ 0.81
LSM4-201ENST00000252816 KPNA4O00629 521 aaPredicted RBP20.1■□□□□ 0.81
LSM4-201ENST00000252816 CH25HO95992 272 aa20.1■□□□□ 0.81
LSM4-201ENST00000252816 CD99P14209 185 aa20.1■□□□□ 0.81
LSM4-201ENST00000252816 CD40P25942 277 aa20.1■□□□□ 0.81
LSM4-201ENST00000252816 PUDPQ08623 228 aa20.1■□□□□ 0.81
LSM4-201ENST00000252816 SPOCK1Q08629 439 aa20.1■□□□□ 0.81
LSM4-201ENST00000252816 PIN1Q13526 163 aaPredicted RBP20.1■□□□□ 0.81
LSM4-201ENST00000252816 OR1K1Q8NGR3 316 aa20.1■□□□□ 0.81
LSM4-201ENST00000252816 OR5J2Q8NH18 312 aa20.1■□□□□ 0.81
LSM4-201ENST00000252816 FBXW5Q969U6 566 aa20.1■□□□□ 0.81
LSM4-201ENST00000252816 CMTM5Q96DZ9 223 aa20.1■□□□□ 0.81
LSM4-201ENST00000252816 TPD52L3Q96J77 140 aa20.1■□□□□ 0.81
LSM4-201ENST00000252816 MEPEQ9NQ76 525 aaPredicted RBP20.1■□□□□ 0.81
LSM4-201ENST00000252816 AMDHD2Q9Y303 409 aa20.1■□□□□ 0.81
LSM4-201ENST00000252816 M0R1B8 84 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 SLC43A1O75387 559 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 SOD3P08294 240 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 DANCRP0C864 163 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 GSK3BP49841 420 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 TAS2R41P59536 307 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 SELENOWP63302 87 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 ROR2Q01974 943 aaKnown RBP20.09■□□□□ 0.81
LSM4-201ENST00000252816 POU3F1Q03052 451 aaPredicted RBP20.09■□□□□ 0.81
LSM4-201ENST00000252816 TBRG1Q3YBR2 411 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 KLHL17Q6TDP4 642 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 TMEM108Q6UXF1 575 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 NKAIN4Q8IVV8 208 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 LRRC17Q8N6Y2 441 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 TMEM171Q8WVE6 324 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 BCL2L2Q92843 193 aaPredicted RBP20.09■□□□□ 0.81
LSM4-201ENST00000252816 ZNF837Q96EG3 531 aaPredicted RBP20.09■□□□□ 0.81
LSM4-201ENST00000252816 PERPQ96FX8 193 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 TXNDC15Q96J42 360 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 EMC6Q9BV81 110 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 SLC19A3Q9BZV2 496 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 MED29Q9NX70 200 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 RIMS3Q9UJD0 308 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 LAMP3Q9UQV4 416 aa20.09■□□□□ 0.81
LSM4-201ENST00000252816 RPL36A-HNRNPH2H7BZ11 118 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 CXCR6O00574 342 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 OR5F1O95221 314 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 AHCYP23526 432 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 PTAFRP25105 342 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 PRDX6P30041 224 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 PRPS1P60891 318 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 PGGHGQ32M88 737 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 PHYHD1Q5SRE7 291 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 HMBOX1Q6NT76 420 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 PXKQ7Z7A4 578 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 VTCN1Q7Z7D3 282 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 PIAS4Q8N2W9 510 aaPredicted RBP20.08■□□□□ 0.81
LSM4-201ENST00000252816 SMAP2Q8WU79 429 aaPredicted RBP20.08■□□□□ 0.81
LSM4-201ENST00000252816 NELFAQ9H3P2 528 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 ALG2Q9H553 416 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 FKRPQ9H9S5 495 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 GPR35Q9HC97 309 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 NANSQ9NR45 359 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 ABCD2Q9UBJ2 740 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 NOX1Q9Y5S8 564 aa20.08■□□□□ 0.81
LSM4-201ENST00000252816 PLCE1Q9P212 2302 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 A0A096LPE4 126 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 A0A1W2PPZ6 126 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 SLC35F4A4IF30 521 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 C11orf98E9PRG8 122 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 AKAP8O43823 692 aaKnown RBP20.07■□□□□ 0.8
LSM4-201ENST00000252816 ADORA3P0DMS8 318 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 PTH2RP49190 550 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 UGT2B15P54855 530 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 CDH11P55287 796 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 PSME3P61289 254 aa20.07■□□□□ 0.8
LSM4-201ENST00000252816 Q5PR19 223 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms