RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 LOC102725191A0A1B0GVB3 256 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 A0A1B0GWA3 101 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 RNF212BA8MTL3 300 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 M0R082 166 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 IGKV3-15P01624 115 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 IGLV1-44P01699 117 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 CECR9P0C854 216 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 CBR1P16152 277 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 TUBA1BP68363 451 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 TUBA4AP68366 448 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 ARF1P84077 181 aaKnown RBP18.31■□□□□ 0.52
NEDD8-201ENST00000250495 MFSD13AQ14CX5 517 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 ALG10BQ5I7T1 473 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 FAM91A1Q658Y4 838 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 ULK3Q6PHR2 472 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 TUBA1AQ71U36 451 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 SLC46A3Q7Z3Q1 461 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 CCDC36Q8IYA8 594 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 PIK3C3Q8NEB9 887 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 ZNF417Q8TAU3 575 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 SPDL1Q96EA4 605 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 SLC47A1Q96FL8 570 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 SORCS2Q96PQ0 1159 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 ZNF587Q96SQ5 575 aaPredicted RBP18.31■□□□□ 0.52
NEDD8-201ENST00000250495 PIMREGQ9BSJ6 248 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 CCDC28BQ9BUN5 200 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 NELFAQ9H3P2 528 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 GPR35Q9HC97 309 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 MYOZ1Q9NP98 299 aaPredicted RBP18.31■□□□□ 0.52
NEDD8-201ENST00000250495 CCDC167Q9P0B6 97 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 SLAMF8Q9P0V8 285 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 B3GAT1Q9P2W7 334 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 LPAR3Q9UBY5 353 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 GMEB1Q9Y692 573 aa18.31■□□□□ 0.52
NEDD8-201ENST00000250495 OR4A8P0C604 315 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 IGHV4-31P0DP07 118 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 GRPRP30550 384 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 GZMKP49863 264 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 IDH3AP50213 366 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 IL1RL1Q01638 556 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 EFNB3Q15768 340 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 ADIPOQQ15848 244 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 VHLLQ6RSH7 139 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 MSRB3Q8IXL7 192 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 BHLHE22Q8NFJ8 381 aaPredicted RBP18.3■□□□□ 0.52
NEDD8-201ENST00000250495 LRRC8CQ8TDW0 803 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 TMEM158Q8WZ71 300 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 ZNF607Q96SK3 696 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 TMEM27Q9HBJ8 222 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 SEC14L4Q9UDX3 406 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 CORO2BQ9UQ03 480 aa18.3■□□□□ 0.52
NEDD8-201ENST00000250495 LOC390937A0A1W2PQ73 354 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 PRORSD1PA6NEY8 169 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 EVPLLA8MZ36 301 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 VWC2LB2RUY7 222 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 SERPINB7O75635 380 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 SLC6A2P23975 617 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 HTR2AP28223 471 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 ARR3P36575 388 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 NCALDP61601 193 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 CEACAM16Q2WEN9 425 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 PAGE3Q5JUK9 113 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 ZNF540Q8NDQ6 660 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 ADPRHL1Q8NDY3 354 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 NUP37Q8NFH4 326 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 IL17RDQ8NFM7 739 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 OR6S1Q8NH40 331 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 EPYCQ99645 322 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 RSPO3Q9BXY4 272 aaPredicted RBP18.29■□□□□ 0.52
NEDD8-201ENST00000250495 RAB1BQ9H0U4 201 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 PLK3Q9H4B4 646 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 TMEM38AQ9H6F2 299 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 EVA1AQ9H8M9 152 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 CRLF2Q9HC73 371 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 VAPAQ9P0L0 249 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 TESQ9UGI8 421 aaKnown RBP18.29■□□□□ 0.52
NEDD8-201ENST00000250495 SLC13A4Q9UKG4 626 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 CORINQ9Y5Q5 1042 aa18.29■□□□□ 0.52
NEDD8-201ENST00000250495 A0A087WUJ7 227 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 TPST1O60507 370 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 LMX1BO60663 402 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 NQO1P15559 274 aaKnown RBP18.28■□□□□ 0.52
NEDD8-201ENST00000250495 GPX2P18283 190 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 CALCRP30988 508 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 NR4A2P43354 598 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 RGS8P57771 180 aaPredicted RBP18.28■□□□□ 0.52
NEDD8-201ENST00000250495 SCARB2Q14108 478 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 GGTLC2Q14390 218 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 CARTPTQ16568 116 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 ZNF771Q7L3S4 317 aaPredicted RBP18.28■□□□□ 0.52
NEDD8-201ENST00000250495 UEVLDQ8IX04 471 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 RNF217Q8TC41 542 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 FOXN4Q96NZ1 517 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 OR2M2Q96R28 347 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 EBF4Q9BQW3 602 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 REPIN1Q9BWE0 567 aaKnown RBP18.28■□□□□ 0.52
NEDD8-201ENST00000250495 PRR14Q9BWN1 585 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 SHARPINQ9H0F6 387 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 ZNF442Q9H7R0 627 aa18.28■□□□□ 0.52
NEDD8-201ENST00000250495 SLC52A3Q9NQ40 469 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms