RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 HBMQ6B0K9 141 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 CADM4Q8NFZ8 388 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 TRMT10AQ8TBZ6 339 aaKnown RBP14.35□□□□□ -0.11
LRFN1-201ENST00000248668 GFM1Q96RP9 751 aaKnown RBP14.35□□□□□ -0.11
LRFN1-201ENST00000248668 UCK1Q9HA47 277 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 FGF21Q9NSA1 209 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 ACOD1A6NK06 481 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 SMLR1H3BR10 107 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 DUX1O43812 170 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 MAP2K3P46734 347 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 ACTC1P68032 377 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 ACTA1P68133 377 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 OGFOD3Q6PK18 319 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 RNF170Q96K19 258 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 ZNF578Q96N58 590 aaPredicted RBP14.35□□□□□ -0.11
LRFN1-201ENST00000248668 SLC46A1Q96NT5 459 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 LPAR4Q99677 370 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 ALG12Q9BV10 488 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 EML5Q05BV3 1969 aa14.35□□□□□ -0.11
LRFN1-201ENST00000248668 A0A1B0GTH9 108 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 CPED1A4D0V7 1026 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 BLACEA4D250 179 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 CDC40O60508 579 aaKnown RBP eCLIP14.34□□□□□ -0.11
LRFN1-201ENST00000248668 YES1P07947 543 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 DIO1P49895 249 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 GBX2P52951 348 aaPredicted RBP14.34□□□□□ -0.11
LRFN1-201ENST00000248668 SIRPAP78324 504 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 PLCXD2Q0VAA5 305 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 COL13A1Q5TAT6 717 aaPredicted RBP14.34□□□□□ -0.11
LRFN1-201ENST00000248668 FNDC7Q5VTL7 733 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 FAM174AQ8TBP5 190 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 TAAR8Q969N4 342 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 VN1R1Q9GZP7 353 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 EPHA6Q9UF33 1036 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 FAM240BA0A1B0GVZ2 78 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 TMEM72A0PK05 275 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 H3BMH7 237 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 NRG3P56975 720 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 LGALS3BPQ08380 585 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 QPRTQ15274 297 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 ZMYND11Q15326 602 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 PLET1Q6UQ28 207 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 PLXDC1Q8IUK5 500 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 IZUMO1Q8IYV9 350 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 ADIPOR1Q96A54 375 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 MMP25Q9NPA2 562 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 HAO2Q9NYQ3 351 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 KLHL21Q9UJP4 597 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 IGKV3-11P04433 115 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 OR2T7P0C7T2 308 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 OR8G3PP0DMU2 310 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 AHCYP23526 432 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 THBS2P35442 1172 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 DDOSTP39656 456 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 RPL18Q07020 188 aaKnown RBP14.34□□□□□ -0.11
LRFN1-201ENST00000248668 POU4F2Q12837 409 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 CDK5R1Q15078 307 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 EBPQ15125 230 aaKnown RBP14.34□□□□□ -0.11
LRFN1-201ENST00000248668 KRT74Q7RTS7 529 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 TMPRSS9Q7Z410 1059 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 ZNF433Q8N7K0 673 aaPredicted RBP14.34□□□□□ -0.11
LRFN1-201ENST00000248668 OR2T27Q8NH04 317 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 ZFP3Q96NJ6 502 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 TBL1XR1Q9BZK7 514 aa14.34□□□□□ -0.11
LRFN1-201ENST00000248668 EEF1E1O43324 174 aaKnown RBP14.33□□□□□ -0.11
LRFN1-201ENST00000248668 RAB3BP20337 219 aa14.33□□□□□ -0.11
LRFN1-201ENST00000248668 TALDO1P37837 337 aa14.33□□□□□ -0.11
LRFN1-201ENST00000248668 CENPAP49450 140 aa14.33□□□□□ -0.11
LRFN1-201ENST00000248668 SRP9P49458 86 aaKnown RBP14.33□□□□□ -0.11
LRFN1-201ENST00000248668 TAS2R43P59537 309 aa14.33□□□□□ -0.11
LRFN1-201ENST00000248668 FRMD6Q96NE9 622 aa14.33□□□□□ -0.11
LRFN1-201ENST00000248668 PELOQ9BRX2 385 aaKnown RBP14.33□□□□□ -0.11
LRFN1-201ENST00000248668 RNF121Q9H920 327 aa14.33□□□□□ -0.11
LRFN1-201ENST00000248668 ZMAT5Q9UDW3 170 aaKnown RBP14.33□□□□□ -0.11
LRFN1-201ENST00000248668 KLHDC2Q9Y2U9 406 aa14.33□□□□□ -0.11
LRFN1-201ENST00000248668 NCOR1O75376 2440 aa14.33□□□□□ -0.12
LRFN1-201ENST00000248668 A0A0G2JK05 382 aa14.33□□□□□ -0.12
LRFN1-201ENST00000248668 LYRM1O43325 122 aa14.33□□□□□ -0.12
LRFN1-201ENST00000248668 NOS1APO75052 506 aaPredicted RBP14.33□□□□□ -0.12
LRFN1-201ENST00000248668 TFPIP10646 304 aa14.33□□□□□ -0.12
LRFN1-201ENST00000248668 AFF3P51826 1226 aaKnown RBP14.33□□□□□ -0.12
LRFN1-201ENST00000248668 SOSTQ9BQB4 213 aa14.33□□□□□ -0.12
LRFN1-201ENST00000248668 TSPAN10Q9H1Z9 355 aaPredicted RBP14.33□□□□□ -0.12
LRFN1-201ENST00000248668 BRD7Q9NPI1 651 aa14.33□□□□□ -0.12
LRFN1-201ENST00000248668 ADAM30Q9UKF2 790 aa14.33□□□□□ -0.12
LRFN1-201ENST00000248668 IGKV3D-11A0A0A0MRZ8 115 aa14.33□□□□□ -0.12
LRFN1-201ENST00000248668 ATF1P18846 271 aa14.33□□□□□ -0.12
LRFN1-201ENST00000248668 PRPS1P60891 318 aa14.33□□□□□ -0.12
LRFN1-201ENST00000248668 ELAVL1Q15717 326 aaKnown RBP14.33□□□□□ -0.12
LRFN1-201ENST00000248668 SLC51BQ86UW2 128 aa14.33□□□□□ -0.12
LRFN1-201ENST00000248668 FAM71CQ8NEG0 241 aa14.33□□□□□ -0.12
LRFN1-201ENST00000248668 OR14A16Q8NHC5 309 aa14.33□□□□□ -0.12
LRFN1-201ENST00000248668 SMIM19Q96E16 107 aa14.33□□□□□ -0.12
LRFN1-201ENST00000248668 TMEM43Q9BTV4 400 aa14.33□□□□□ -0.12
LRFN1-201ENST00000248668 NUPL2O15504 423 aaKnown RBP14.32□□□□□ -0.12
LRFN1-201ENST00000248668 ZNF780AO75290 641 aaPredicted RBP14.32□□□□□ -0.12
LRFN1-201ENST00000248668 CD14P08571 375 aa14.32□□□□□ -0.12
LRFN1-201ENST00000248668 PTPRZ1P23471 2315 aaPredicted RBP14.32□□□□□ -0.12
LRFN1-201ENST00000248668 NANOS3P60323 173 aaKnown RBP14.32□□□□□ -0.12
LRFN1-201ENST00000248668 RPS4XP62701 263 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms