RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ZNF593O00488 134 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-202ENST00000244303 SRPX2O60687 465 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-202ENST00000244303 RPP14O95059 124 aaKnown RBP13.11□□□□□ -0.31
HIF3A-202ENST00000244303 NSA2O95478 260 aaKnown RBP13.11□□□□□ -0.31
HIF3A-202ENST00000244303 CLPSP04118 112 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 M6PRP20645 277 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 BLKP51451 505 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 CLDN12P56749 244 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 IL10RAQ13651 578 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF74Q16587 644 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 TOR2AQ5JU69 321 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF684Q5T5D7 378 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 FCRLAQ7L513 359 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 SYT13Q7L8C5 426 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 JAZF1Q86VZ6 243 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 SERPINA12Q8IW75 414 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 SLC35F3Q8IY50 421 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 ZSCAN1Q8NBB4 408 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 OR6C4Q8NGE1 309 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 SLC25A38Q96DW6 304 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 CMTM3Q96MX0 182 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 LRRC61Q9BV99 259 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 NARFLQ9H6Q4 476 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 MRPL39Q9NYK5 338 aaKnown RBP13.11□□□□□ -0.31
HIF3A-202ENST00000244303 TRIOO75962 3097 aa13.11□□□□□ -0.31
HIF3A-202ENST00000244303 PCDH15Q96QU1 1955 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 TMEM72A0PK05 275 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 BLACEA4D250 179 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 ANKRD61A6NGH8 418 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 PDCD5O14737 125 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 OR8G3PP0DMU2 310 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 DPP4P27487 766 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 STPG1Q5TH74 334 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 WBP2NLQ6ICG8 309 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 CBLN3Q6UW01 205 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF782Q6ZMW2 699 aaPredicted RBP13.1□□□□□ -0.31
HIF3A-202ENST00000244303 MED25Q71SY5 747 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 FAM122BQ7Z309 247 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 ATG4DQ86TL0 474 aaPredicted RBP13.1□□□□□ -0.31
HIF3A-202ENST00000244303 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.1□□□□□ -0.31
HIF3A-202ENST00000244303 SPERTQ8NA61 448 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF527Q8NB42 609 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 FAM71CQ8NEG0 241 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 GPR137Q96N19 417 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF578Q96N58 590 aaPredicted RBP13.1□□□□□ -0.31
HIF3A-202ENST00000244303 TPSD1Q9BZJ3 242 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 C20orf85Q9H1P6 137 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 LIN7BQ9HAP6 207 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 NANSQ9NR45 359 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 UCKL1Q9NWZ5 548 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 KCNN3Q9UGI6 736 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 RCE1Q9Y256 329 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 HIF3AQ9Y2N7 669 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 KLHDC2Q9Y2U9 406 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 CACNA1IQ9P0X4 2223 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 B8ZZF3 427 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 SHOXO15266 292 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF749O43361 778 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 GMDSO60547 372 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 F13BP05160 661 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 RAG2P55895 527 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 PER3P56645 1201 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 CTXN1P60606 82 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 ALG10Q5BKT4 473 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 FNDC7Q5VTL7 733 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 SFRP4Q6FHJ7 346 aaPredicted RBP13.1□□□□□ -0.31
HIF3A-202ENST00000244303 IDO2Q6ZQW0 420 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 LUZP2Q86TE4 346 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF440Q8IYI8 595 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 EXD3Q8N9H8 876 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 LSM14AQ8ND56 463 aaKnown RBP13.1□□□□□ -0.31
HIF3A-202ENST00000244303 OR56B4Q8NH76 319 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 PHOSPHO1Q8TCT1 267 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 NKIRAS2Q9NYR9 191 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 GLTPQ9NZD2 209 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 V9GY05 133 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 MYO15AQ9UKN7 3530 aa13.1□□□□□ -0.31
HIF3A-202ENST00000244303 GPR171O14626 319 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 MBTPS2O43462 519 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 SLC22A5O76082 557 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 CD14P08571 375 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 UBL4AP11441 157 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 HPGDP15428 266 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 SKP2Q13309 424 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 TMEM255AQ5JRV8 349 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 TEX261Q6UWH6 196 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 SLC16A9Q7RTY1 509 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 DEFB119Q8N690 84 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF321PQ8N8H1 164 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 LRRC75AQ8NAA5 344 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 TSTD1Q8NFU3 115 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 OR52I2Q8NH67 350 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 LRRC20Q8TCA0 184 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 ADAMTS18Q8TE60 1221 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 ZNF524Q96C55 264 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 TCTN2Q96GX1 697 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 LMAN1LQ9HAT1 526 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 SRA1Q9HD15 236 aaKnown RBP13.09□□□□□ -0.31
HIF3A-202ENST00000244303 MMP25Q9NPA2 562 aa13.09□□□□□ -0.31
HIF3A-202ENST00000244303 U3KQ87 197 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms