RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 PIRO00625 290 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 FGF3P11487 239 aaPredicted RBP12.3□□□□□ -0.44
NEK9-201ENST00000238616 PIPP12273 146 aaPredicted RBP12.3□□□□□ -0.44
NEK9-201ENST00000238616 NLRC3Q7RTR2 1065 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 FRMD1Q8N878 549 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 MCOLN1Q9GZU1 580 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 BABAM2Q9NXR7 383 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 NUBP2Q9Y5Y2 271 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 GOSR1O95249 250 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 THBS1P07996 1170 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 GLB1P16278 677 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 TLE4Q04727 773 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 TMEM130Q8N3G9 435 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 AGBL5Q8NDL9 886 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 OR10J5Q8NHC4 309 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 RAB3CQ96E17 227 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 PLSCR3Q9NRY6 295 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 CAMTA1Q9Y6Y1 1673 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 MITFO75030 526 aaPredicted RBP12.3□□□□□ -0.44
NEK9-201ENST00000238616 ITGB7P26010 798 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 ETV4P43268 484 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 OR1D5P58170 312 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 CATR1Q13166 79 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 SIX2Q9NPC8 291 aa12.3□□□□□ -0.44
NEK9-201ENST00000238616 DOCK2Q92608 1830 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 HOXA11P31270 313 aaPredicted RBP12.29□□□□□ -0.44
NEK9-201ENST00000238616 OR7G3Q8NG95 312 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 TMEM43Q9BTV4 400 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 CPNE5Q9HCH3 593 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 ZDHHC18Q9NUE0 388 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 STYXL1Q9Y6J8 313 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 SHISA7A6NL88 538 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 TP53P04637 393 aaPredicted RBP12.29□□□□□ -0.44
NEK9-201ENST00000238616 DNAJB1P25685 340 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 Q1RN00 199 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 TMEM41BQ5BJD5 291 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 AAED1Q7RTV5 226 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 FAM58AQ8N1B3 248 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 PTTG3PQ9NZH4 202 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 B3GAT1Q9P2W7 334 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 INTS6Q9UL03 887 aaKnown RBP12.29□□□□□ -0.44
NEK9-201ENST00000238616 RASD1Q9Y272 281 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 PIK3C2AO00443 1686 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 SCN5AQ14524 2016 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 ONECUT2O95948 504 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 G0S2P27469 103 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 SELENOWP63302 87 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 TMPRSS11FQ6ZWK6 438 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 H2BFWTQ7Z2G1 175 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 TSPYL5Q86VY4 417 aaPredicted RBP12.29□□□□□ -0.44
NEK9-201ENST00000238616 ADAMTS16Q8TE57 1224 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 ZBED3Q96IU2 234 aaPredicted RBP12.29□□□□□ -0.44
NEK9-201ENST00000238616 CLSTN3Q9BQT9 956 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 METTL9Q9H1A3 318 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 CDCP1Q9H5V8 836 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 CLEC5AQ9NY25 188 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 ONECUT1Q9UBC0 465 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 ADAMTS6Q9UKP5 1117 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 ARL2-SNX15V9GYD0 113 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 C1orf105O95561 183 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 HSF5Q4G112 596 aaPredicted RBP12.29□□□□□ -0.44
NEK9-201ENST00000238616 PDZD3Q86UT5 571 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 CATSPERDQ86XM0 798 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 QRSL1Q9H0R6 528 aaKnown RBP12.29□□□□□ -0.44
NEK9-201ENST00000238616 AGPAT4Q9NRZ5 378 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 GAPDHSO14556 408 aaPredicted RBP12.29□□□□□ -0.44
NEK9-201ENST00000238616 TBPP20226 339 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 ENPP1P22413 925 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 ELLP55199 621 aaPredicted RBP12.29□□□□□ -0.44
NEK9-201ENST00000238616 CRMP1Q14194 572 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 KIR2DS3Q14952 304 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 RGNQ15493 299 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 PHYHD1Q5SRE7 291 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 PODNL1Q6PEZ8 512 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 ANKRD19PQ9H560 264 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 LYRM1O43325 122 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 RFPL3O75679 317 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 F11P03951 625 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 PRKACAP17612 351 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 LINC00346Q8IVM7 164 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 MISPQ8IVT2 679 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 BORCS6Q96GS4 357 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 RNF170Q96K19 258 aa12.29□□□□□ -0.44
NEK9-201ENST00000238616 SULT1C2O00338 296 aa12.28□□□□□ -0.44
NEK9-201ENST00000238616 RING1Q06587 406 aa12.28□□□□□ -0.44
NEK9-201ENST00000238616 EIF4HQ15056 248 aaKnown RBP12.28□□□□□ -0.44
NEK9-201ENST00000238616 HACD4Q5VWC8 232 aa12.28□□□□□ -0.44
NEK9-201ENST00000238616 PQLC3Q8N755 202 aa12.28□□□□□ -0.44
NEK9-201ENST00000238616 NECAP1Q8NC96 275 aa12.28□□□□□ -0.44
NEK9-201ENST00000238616 OR6T1Q8NGN1 323 aa12.28□□□□□ -0.44
NEK9-201ENST00000238616 DUSP2Q05923 314 aa12.28□□□□□ -0.44
NEK9-201ENST00000238616 TMEM178AQ8NBL3 297 aa12.28□□□□□ -0.44
NEK9-201ENST00000238616 CPEB3Q8NE35 698 aaKnown RBP12.28□□□□□ -0.44
NEK9-201ENST00000238616 SLC30A7Q8NEW0 376 aa12.28□□□□□ -0.44
NEK9-201ENST00000238616 GAREM1Q9H706 876 aa12.28□□□□□ -0.44
NEK9-201ENST00000238616 FAM166BA8MTA8 275 aa12.28□□□□□ -0.44
NEK9-201ENST00000238616 KCNK5O95279 499 aa12.28□□□□□ -0.44
NEK9-201ENST00000238616 PLK3Q9H4B4 646 aa12.28□□□□□ -0.44
NEK9-201ENST00000238616 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
NEK9-201ENST00000238616 LGI1O95970 557 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms