RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 HDHD2Q9H0R4 259 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 DUSP15Q9H1R2 295 aaPredicted RBP14.69□□□□□ -0.06
UBE3D-201ENST00000237186 TP63Q9H3D4 680 aaPredicted RBP14.69□□□□□ -0.06
UBE3D-201ENST00000237186 RABL2AQ9UBK7 228 aaPredicted RBP14.69□□□□□ -0.06
UBE3D-201ENST00000237186 RABL2BQ9UNT1 228 aa14.69□□□□□ -0.06
UBE3D-201ENST00000237186 TRAV36DV7A0A075B6V5 113 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 A0A1W2PPK0 400 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 PRR32B1ATL7 298 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 TOX3O15405 576 aaPredicted RBP14.68□□□□□ -0.06
UBE3D-201ENST00000237186 PIN1P1O15428 100 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 ORC5O43913 435 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 MT-ATP6P00846 226 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 HIST1H2ABP04908 130 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 PGCP20142 388 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 CXCR1P25024 350 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 PSMB10P40306 273 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 NANOS3P60323 173 aaKnown RBP14.68□□□□□ -0.06
UBE3D-201ENST00000237186 PITPNAQ00169 270 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 PLCXD2Q0VAA5 305 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 GPR176Q14439 515 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 PLA1AQ53H76 456 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 MESTQ5EB52 335 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 WDR45BQ5MNZ6 344 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 ARHGAP40Q5TG30 622 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 EEF1A1P5Q5VTE0 462 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 TIGD3Q6B0B8 471 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 BAIAP2L2Q6UXY1 529 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 HIST3H2AQ7L7L0 130 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 MARCH3Q86UD3 253 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 HEATR5AQ86XA9 2040 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 CDC20BQ86Y33 519 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 HIST1H2ACQ93077 130 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 MAP6Q96JE9 813 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 TSSK2Q96PF2 358 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 TSPAN32Q96QS1 320 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 DPYSL5Q9BPU6 564 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 TGIF2Q9GZN2 237 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 NRSN2Q9GZP1 204 aa14.68□□□□□ -0.06
UBE3D-201ENST00000237186 ZNF768Q9H5H4 540 aaKnown RBP14.68□□□□□ -0.06
UBE3D-201ENST00000237186 CTDSPLO15194 276 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 FADS1O60427 444 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 NPIPB7O75200 414 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 UPK3AO75631 287 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 ZFPL1O95159 310 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 ABHD16AO95870 558 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 F13BP05160 661 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 ABCD3P28288 659 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 LIX1LQ8IVB5 337 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 TCTE3Q8IZS6 198 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 ADAMTS14Q8WXS8 1223 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 OMA1Q96E52 524 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 TRAF4Q9BUZ4 470 aaPredicted RBP14.67□□□□□ -0.06
UBE3D-201ENST00000237186 NOX4Q9NPH5 578 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 FGF21Q9NSA1 209 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 DDX28Q9NUL7 540 aaKnown RBP14.67□□□□□ -0.06
UBE3D-201ENST00000237186 TAS2R5Q9NYW4 299 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 ZNF346Q9UL40 294 aaKnown RBP14.67□□□□□ -0.06
UBE3D-201ENST00000237186 CAMK2AQ9UQM7 478 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 ALG5Q9Y673 324 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 CDC14CA4D256 554 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 FAM172BPA6NC97 362 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 C4orf47A7E2U8 309 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 FAM171A2A8MVW0 826 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 DCTN6O00399 190 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 PDCD5O14737 125 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 AGFG1P52594 562 aaKnown RBP14.67□□□□□ -0.06
UBE3D-201ENST00000237186 SF3B4Q15427 424 aaKnown RBP eCLIP14.67□□□□□ -0.06
UBE3D-201ENST00000237186 TOMM34Q15785 309 aaPredicted RBP14.67□□□□□ -0.06
UBE3D-201ENST00000237186 SLC36A2Q495M3 483 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 SYT9Q86SS6 491 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 GLCCI1Q86VQ1 547 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 OR6V1Q8N148 313 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 Q8N9G6 341 aaPredicted RBP14.67□□□□□ -0.06
UBE3D-201ENST00000237186 UBASH3BQ8TF42 649 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 CAPSLQ8WWF8 208 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 RNF170Q96K19 258 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 ADAD1Q96M93 576 aaKnown RBP14.67□□□□□ -0.06
UBE3D-201ENST00000237186 TBL1XR1Q9BZK7 514 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 ABCG5Q9H222 651 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 MRM2Q9UI43 246 aaKnown RBP14.67□□□□□ -0.06
UBE3D-201ENST00000237186 TEKT2Q9UIF3 430 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 MKL2Q9ULH7 1088 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 AK6Q9Y3D8 172 aaKnown RBP14.67□□□□□ -0.06
UBE3D-201ENST00000237186 PCDHGA9Q9Y5G4 932 aaKnown RBP14.67□□□□□ -0.06
UBE3D-201ENST00000237186 PCDH15Q96QU1 1955 aa14.67□□□□□ -0.06
UBE3D-201ENST00000237186 A0A1B0GVT2 93 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 TMEM72A0PK05 275 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 HSPB2A8KAH6 182 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 IDSB3KWA1 339 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 INMT-MINDY4F8WBC2 141 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 RENP00797 406 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 ATXN8OSP0DMR3 200 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 GP1BBP13224 206 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 SNRPBP14678 240 aaKnown RBP14.66□□□□□ -0.06
UBE3D-201ENST00000237186 ITPKBP27987 946 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 HOXD12P35452 270 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 P2RX1P51575 399 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 EGR3Q06889 387 aa14.66□□□□□ -0.06
UBE3D-201ENST00000237186 SQSTM1Q13501 440 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms